ggKbase home page

ar4r2_scaffold_10378_11

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: 8547..10139

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT49_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 528.0
  • Bit_score: 915
  • Evalue 1.60e-263
  • rbh
Sigma 54 interacting domain protein {ECO:0000313|EMBL:EIJ34542.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 528.0
  • Bit_score: 915
  • Evalue 2.20e-263
RtcR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 531.0
  • Bit_score: 634
  • Evalue 2.00e-179
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAAAACCACCGTCATCGGCATCCTCGGCTCGCGCCTTGACCACCAAGGCTTAGGTAAACGCCGCCATTCGCGCTGGCGGCCTTCCGTCGGTATCCTCATGCACCCCGATTTTCCGGTGGATGAATTCGTACTGATTCACCACGAAGACGAGGCCGAACTGGCGGGTATCACCTTGCGTGACATGCGCGAACTTGCCCCCAACACGCGCCTCACCAGCCACGTCGTCAACTACAACAACCCTTGGGATTTCGGCGAAGTTTACAGCCAGCTCCACGATTTCACCCGCCACTACCGTTTCGACCCGGAACAAAACCACTACTACGTCCACATCACCACGGGTACACACGTCGCGCAAATCTGCCTGTTTTTGCTGACCGAAGCGAATTACATCCCCGGCAAGCTGCTACAAACATCGCCCAGCAAGGAAAGCACGCAAGGCACGCTGCAAATCATCGACCTCGACCTGTCGCGCTACGACCAAATCGCCAGCCGCTTCGAGCGCGAAGCACAGGAAGGCATGGCGTACCTGAAAAGCGGCATCGACACCCGCAACCCCGCCTTCAACGCCCTGATTGCGCAACTCGAACAAGTGTCGATCCGTTCCGCCGCGCCTATCCTGATCACGGGTGCTACAGGTGTCGGCAAGTCGCGCCTCGCCAAACGCATTTACGCACTCAAAAAACAACGAGGGCAAGTCAGCGGCAAACTGGTGGAAGTCAACTGCGCCACCTTGCGCGGAGACAATGCCATGTCCGCGCTGTTCGGACATGTGAAAGGCGCATTCACCGGCGCACTCACCGCTCGCACCGGCTTGCTGCGTGAAGCCGACAAGGGTTTGCTGTTTCTGGATGAAATCGGCGAACTGGGGCTGGACGAACAAGCGATGTTGTTACGAGCCATCGAAGACAAAGTATTCACCCCCTTCGGCAGCGACAAGGAAACCAGCAGCGATTTCCAACTGATTGCCGGAACCAACCGCGACCTGTTCCAACGGGTACGCGACGGTAAATTCCGCGAAGACTTGCTGGCTCGCATCAATTTGTGGACATACGAACTCCCCGGTCTACGCCACCGCCTCGAAGATTTGGAAGCGAATATCGAATACGAATTGCAGCAATTCACCCGCAAGGTCGGTCACAAAGTCAGCTTCAACAAAGCGGCGCGGGAACAATACCTCGCGTTTGCGCAAACCCCGGCGGCAACTTGGCGGGCGAATTTCCGCGACCTCAATTCCAGCATCACGCGCATGGCAACGCTGGCAAATGGCGGGCGGATTACCGAGGAAAGCGTGACGGAGGAAATCCGCCGCTTGCGCTACGATTGGGGCAGTTTTCAGGAAGCAACAGCCAGCAATAATACCGATAGCATCTTGCGCGAATTCGTGGTGGCTGAGGTGCTGGAAACCATCGACCATTTCGATCGGGTGCAGTTGGCGGAAGTCATCCGCGTGTGCCGCACCGCCAAAAGTCTTGCAGATGCAGGGCGCAGTCTGTTCAACGTCAGCCGCACCCAACGCGCCAGCGCGAACGATTCGCATCGCTTGCGGGTGTATTTGCAGAAATACGGGCTAACTTTCCAGCAACTCACCTAA
PROTEIN sequence
Length: 531
MKTTVIGILGSRLDHQGLGKRRHSRWRPSVGILMHPDFPVDEFVLIHHEDEAELAGITLRDMRELAPNTRLTSHVVNYNNPWDFGEVYSQLHDFTRHYRFDPEQNHYYVHITTGTHVAQICLFLLTEANYIPGKLLQTSPSKESTQGTLQIIDLDLSRYDQIASRFEREAQEGMAYLKSGIDTRNPAFNALIAQLEQVSIRSAAPILITGATGVGKSRLAKRIYALKKQRGQVSGKLVEVNCATLRGDNAMSALFGHVKGAFTGALTARTGLLREADKGLLFLDEIGELGLDEQAMLLRAIEDKVFTPFGSDKETSSDFQLIAGTNRDLFQRVRDGKFREDLLARINLWTYELPGLRHRLEDLEANIEYELQQFTRKVGHKVSFNKAAREQYLAFAQTPAATWRANFRDLNSSITRMATLANGGRITEESVTEEIRRLRYDWGSFQEATASNNTDSILREFVVAEVLETIDHFDRVQLAEVIRVCRTAKSLADAGRSLFNVSRTQRASANDSHRLRVYLQKYGLTFQQLT*