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ar4r2_scaffold_10378

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_10378_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34844.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_10378_2

Not on your lists

599..2053
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWX8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein rbh
ar4r2_scaffold_10378_3
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2380..2643
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037A9436
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
ar4r2_scaffold_10378_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2644..3672
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU17_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ34860.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_10378_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3652..4833)
DNA (1182bp) protein (394aa)
Transcriptional regulator domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BU18_9GAMM rbh
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:EIJ34861.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
histidine kinase
ar4r2_scaffold_10378_6
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4943..5362)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ00373.1}; TaxID=151081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas ruthenica.;"
ar4r2_scaffold_10378_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5389..5664
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35950.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_10378_8
unknown

Not on your lists

5691..6095
DNA (405bp) protein (135aa)

This feature has no annotations

ar4r2_scaffold_10378_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6110..7339)
DNA (1230bp) protein (410aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
RTCB protein n=1 Tax=Thiothrix flexilis RepID=UPI0003703959 rbh
RtcB protein rbh
ar4r2_scaffold_10378_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7499..8383)
DNA (885bp) protein (295aa)
Fructosamine/Ketosamine-3-kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUK8_9GAMM rbh
Fructosamine/Ketosamine-3-kinase {ECO:0000313|EMBL:EIJ35051.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
fructosamine-3-kinase rbh
ar4r2_scaffold_10378_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8547..10139
DNA (1593bp) protein (531aa)
Sigma 54 interacting domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT49_9GAMM rbh
Sigma 54 interacting domain protein {ECO:0000313|EMBL:EIJ34542.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
RtcR family transcriptional regulator rbh
ar4r2_scaffold_10378_12
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10345..11352
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003701ED1 rbh
dctP; C4-dicarboxylate-binding periplasmic protein rbh
C4-dicarboxylate-binding periplasmic protein {ECO:0000313|EMBL:CAI08479.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
ar4r2_scaffold_10378_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11432..12052
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037BC576 rbh
dctQ; C4-dicarboxylate transport system permease, small subunit
C4-dicarboxylate transport system permease, small subunit {ECO:0000313|EMBL:BAL24232.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ar4r2_scaffold_10378_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12049..12786
DNA (738bp) protein (246aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BR0_DECAR rbh
TRAP dicarboxylate transporter, DctM subunit rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AAZ47721.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying 14 items

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