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ar4r2_scaffold_9712

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_9712_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1467)
DNA (1467bp) protein (489aa)
DNA mismatch repair protein MutS n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=MUTS_THICR rbh
DNA mismatch repair protein MutS rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_9712_2
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1492..2529)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B5C980 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM67015.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
hypothetical protein rbh
ar4r2_scaffold_9712_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2735..3238
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000374F7F9
Damage-inducible protein CinA {ECO:0000313|EMBL:KDN96592.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
CinA-like protein
ar4r2_scaffold_9712_4
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3360..4379
DNA (1020bp) protein (340aa)
Protein RecA n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XJB8_METNJ rbh
recombinase A rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
ar4r2_scaffold_9712_5
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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4366..4827
DNA (462bp) protein (154aa)
Putative Regulatory protein recX n=3 Tax=Vibrio nigripulchritudo RepID=U4ER06_9VIBR
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
recX family protein
ar4r2_scaffold_9712_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4827..7454
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Alanine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYA_THICR rbh
ar4r2_scaffold_9712_7
Pseudomonas sp., Proteobacteria, Bacteria

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7482..8699
DNA (1218bp) protein (406aa)
Aspartokinase; EC=2.7.2.4;; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
aspartate kinase (EC:2.7.2.4) rbh
Aspartokinase n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I6Z9_PSEE4 rbh
ar4r2_scaffold_9712_trna_1
unknown

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8799..8885
DNA (87bp)
transferRNA Ser
ar4r2_scaffold_9712_trna_2
unknown

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8958..9031
DNA (74bp)
transferRNA Arg
ar4r2_scaffold_9712_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9185..9325
DNA (141bp) protein (47aa)
Kef-type potassium/proton antiporter, CPA2 family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJX4_POLNA
sodium/hydrogen exchanger
Kef-type potassium/proton antiporter, CPA2 family {ECO:0000313|EMBL:ABM35952.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Displaying 10 items

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