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ar4r2_scaffold_6320

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6320_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..709)
DNA (708bp) protein (236aa)
Pirin n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A7H7_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:KGI79192.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Pirin domain-containing protein
ar4r2_scaffold_6320_2
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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837..1715
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J0A4_PSEUL
LysR family transcriptional regulator {ECO:0000313|EMBL:KIA80950.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
LysR family transcriptional regulator
ar4r2_scaffold_6320_3
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1809..3008)
DNA (1200bp) protein (400aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
Cysteine desulfurase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z0E5_9NEIS rbh
sufS; SufS subfamily cysteine desulfurase rbh
ar4r2_scaffold_6320_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3008..4276)
DNA (1269bp) protein (423aa)
FeS assembly protein SufD n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8Q0_9GAMM
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:AHF00554.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_6320_5
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4254..5000)
DNA (747bp) protein (249aa)
Iron-regulated ABC transporter ATPase subunit SufC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I47_THICR rbh
Cysteine desulfurase {ECO:0000313|EMBL:KDN96863.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
FeS assembly ATPase SufC rbh
ar4r2_scaffold_6320_6
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5103..6584)
DNA (1482bp) protein (494aa)
FeS assembly protein SufB n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9L4_THICA rbh
FeS assembly protein SufB rbh
FeS assembly protein SufB {ECO:0000313|EMBL:AEG30971.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_6320_7
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6659..7591)
DNA (933bp) protein (311aa)
ABC transporter, substrate binding protein (Zinc) n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U9T7_RHIRD
Zinc transporter {ECO:0000313|EMBL:KJF74686.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
znuA; High-affinity zinc uptake system protein znuA
ar4r2_scaffold_6320_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7628..8362
DNA (735bp) protein (245aa)
zinc transporter n=1 Tax=Gallibacterium anatis RepID=UPI000360A04A
ABC transporter family protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_6320_9
Aliivibrio salmonicida, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8355..9140
DNA (786bp) protein (262aa)
zinc transporter n=1 Tax=Salinivibrio costicola RepID=UPI0003955187
znuB; high-affinity zinc uptake system membrane protein ZnuB
High-affinity zinc uptake system membrane protein ZnuB {ECO:0000313|EMBL:CAQ78535.1}; TaxID=316275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain; LFI1238)).;"
ar4r2_scaffold_6320_10
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9112..9981)
DNA (870bp) protein (290aa)
Peptidase M23 n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7AGS3_9ALTE
Peptidase M23 {ECO:0000313|EMBL:GAC34485.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
peptidase M23B
ar4r2_scaffold_6320_trna_2
unknown

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comp(10066..10139)
DNA (74bp)
transferRNA Asp
ar4r2_scaffold_6320_trna_1
unknown

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comp(10147..10219)
DNA (73bp)
transferRNA Val
ar4r2_scaffold_6320_11
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..10777)
DNA (258bp) protein (86aa)
transcriptional regulator n=1 Tax=Thiomicrospira halophila RepID=UPI00036BAF15
transcriptional regulator HU subunit alpha
DNA-binding protein HU-beta {ECO:0000313|EMBL:EGB98310.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ar4r2_scaffold_6320_12
Photobacterium phosphoreum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10997..13405)
DNA (2409bp) protein (803aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1454202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium phosphoreum ANT-2200.;"
peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C72A8 rbh
ATP-dependent protease La rbh
ar4r2_scaffold_6320_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13433..13684)
DNA (252bp) protein (84aa)
ATP-dependent protease n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B563B0
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
Displaying 15 items

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