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ar4r2_scaffold_9977

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_9977_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..532
DNA (531bp) protein (177aa)
Riboflavin synthase, alpha subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7C9_9GAMM
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AHF01017.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_9977_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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628..1740
DNA (1113bp) protein (371aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25) rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Thiomicrospira arctica RepID=UPI00037CB660 rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_9977_3
Sulfurihydrogenibium yellowstonense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

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1842..2315
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=432331 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium yellowstonense SS-5.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V3V1_9AQUI
ar4r2_scaffold_9977_4
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2312..2794
DNA (483bp) protein (161aa)
UPI0003D6505C related cluster n=1 Tax=unknown RepID=UPI0003D6505C
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;"
NusB antitermination factor
ar4r2_scaffold_9977_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2978..3952
DNA (975bp) protein (325aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
thiamine monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DBX3_9GAMM
ar4r2_scaffold_9977_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4062..4403
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7C3_9GAMM
PhnO
PhnO {ECO:0000313|EMBL:AHF01023.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_9977_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4412..5200)
DNA (789bp) protein (263aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FT7_THICR
ar4r2_scaffold_9977_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5200..5577)
DNA (378bp) protein (126aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Thiomicrospira arctica RepID=UPI000377869E
6-pyruvoyl tetrahydrobiopterin synthase
Displaying 8 items

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