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ar4r2_scaffold_2683

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2683_1
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1..705
DNA (705bp) protein (235aa)
methionine aminopeptidase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036F6E74
methionine aminopeptidase, type I
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
ar4r2_scaffold_2683_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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857..3439
DNA (2583bp) protein (861aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Z4_9GAMM rbh
protein-PII uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_2683_3
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3449..3820)
DNA (372bp) protein (124aa)
Bleomycin resistance protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DAG4_9GAMM
Bleomycin resistance protein {ECO:0000313|EMBL:EGV52384.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
glyoxalase/bleomycin resistance protein/dioxygenase
ar4r2_scaffold_2683_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3905..4735
DNA (831bp) protein (277aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117) rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8N0_THICA rbh
ar4r2_scaffold_2683_5
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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5034..6512
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1336752 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fluvialis PG41.;"
Sensor protein torS n=1 Tax=Vibrio fluvialis I21563 RepID=S7HZS7_VIBFL
multi-sensor hybrid histidine kinase
ar4r2_scaffold_2683_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6509..7150
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036F6421
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN95357.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
LuxR family transcriptional regulator
ar4r2_scaffold_2683_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7474..8217)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037B1064
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDN95523.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Crp/Fnr family transcriptional regulator
ar4r2_scaffold_2683_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8340..9077)
DNA (738bp) protein (246aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thiomicrospira arctica RepID=UPI00037D2A9D rbh
ar4r2_scaffold_2683_9
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9077..10156)
DNA (1080bp) protein (360aa)
Alcohol dehydrogenase, iron-containing n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S640_SHEAM rbh
iron-containing alcohol dehydrogenase rbh
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:ABL99846.1}; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
ar4r2_scaffold_2683_10
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10159..10320)
DNA (162bp) protein (54aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Shewanella sp. (strain MR-7) RepID=Q0HUU2_SHESR
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABI43113.1}; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
Displaying 10 items

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