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ar4r2_scaffold_8729

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_8729_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2865
DNA (2865bp) protein (955aa)
Resistance-Nodulation-Cell Division (RND) superfamily transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IH2_THICR rbh
acriflavin resistance protein rbh
Resistance-Nodulation-Cell Division (RND) superfamily transporter {ECO:0000313|EMBL:ABB41051.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_8729_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2978..3406
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8R9_9GAMM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_8729_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3420..3812
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RS9_THICR
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_8729_4
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3874..5157)
DNA (1284bp) protein (428aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13) rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G170_9GAMM rbh
ar4r2_scaffold_8729_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5429..5959
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFY9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42532.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_8729_6
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6009..6623)
DNA (615bp) protein (205aa)
Peptide methionine sulfoxide reductase msrA {ECO:0000313|EMBL:EGV17138.1}; EC=1.8.4.11 {ECO:0000313|EMBL:EGV17138.1};; EC=1.8.4.12 {ECO:0000313|EMBL:EGV17138.1};; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.12) rbh
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003793AD4 rbh
ar4r2_scaffold_8729_7
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6773..8353)
DNA (1581bp) protein (527aa)
IMP cyclohydrolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B61630 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
ar4r2_scaffold_8729_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8432..8677)
DNA (246bp) protein (82aa)
Putative DNA-binding protein fis n=1 Tax=mine drainage metagenome RepID=E6PU18_9ZZZZ
Fis family transcriptional regulator
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_8729_9
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8780..9133
DNA (354bp) protein (118aa)
ferredoxin n=1 Tax=Marinobacterium stanieri RepID=UPI00025598BD
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABB41141.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_8729_10
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9198..9467)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003616CE8
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1216980 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. masoucida NBRC 13784.;"
ar4r2_scaffold_8729_11
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9671..10444
DNA (774bp) protein (258aa)
permease n=1 Tax=Thiomicrospira halophila RepID=UPI00036A1FF2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB40770.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_8729_12
unknown

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10449..11009
DNA (561bp) protein (187aa)

This feature has no annotations

ar4r2_scaffold_8729_13
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10996..11604
DNA (609bp) protein (203aa)
PP-loop family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J95_THICR
PP-loop protein
PP-loop family protein {ECO:0000313|EMBL:ABB40778.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Displaying 13 items

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