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ar4r2_scaffold_7911

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_7911_1
unknown

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3..125
DNA (123bp) protein (41aa)

This feature has no annotations

ar4r2_scaffold_7911_2

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comp(279..1970)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQI6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD39432.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Restriction endonuclease S subunit rbh
ar4r2_scaffold_7911_3
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1963..2997)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30YF2_DESDG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB39294.1}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
ar4r2_scaffold_7911_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2994..4445)
DNA (1452bp) protein (484aa)
N-6 DNA methylase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QN65_CHLP8 rbh
N-6 DNA methylase rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
ar4r2_scaffold_7911_5
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4461..6842)
DNA (2382bp) protein (794aa)
type I restriction-modification system, R subunit (EC:3.1.21.3) rbh
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:ACE83739.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ACE83739.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Helicase, type I site-specific restriction-modification system restriction subunit n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LHY1_9CYAN rbh
ar4r2_scaffold_7911_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7089..8111)
DNA (1023bp) protein (341aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GA0_THICR rbh
pseudouridine synthase rbh
ar4r2_scaffold_7911_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8125..8733)
DNA (609bp) protein (203aa)
translation factor Sua5 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000361416F
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ar4r2_scaffold_7911_8
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8860..9336
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00037619D0
Uncharacterized protein {ECO:0000313|EMBL:KDN96921.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
alkyl hydroperoxide reductase
ar4r2_scaffold_7911_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9374..10822
DNA (1449bp) protein (483aa)
phosphate starvation protein PhoH n=1 Tax=Thiomicrospira halophila RepID=UPI00036123B4 rbh
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KDN96920.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
phosphate starvation protein PhoH
ar4r2_scaffold_7911_10
unknown

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10894..11496
DNA (603bp) protein (201aa)

This feature has no annotations

ar4r2_scaffold_7911_11
unknown

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11546..11824
DNA (279bp) protein (93aa)

This feature has no annotations

ar4r2_scaffold_7911_12
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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11843..12286
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BR28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:BAN68454.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
ar4r2_scaffold_7911_13
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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12312..14546
DNA (2235bp) protein (745aa)
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Nafulsella turpanensis RepID=UPI000347130E rbh
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
ar4r2_scaffold_7911_14
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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14647..15429
DNA (783bp) protein (261aa)
Heat shock protein DnaJ domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7J8_9GAMM
molecular chaperone DnaJ
Molecular chaperone DnaJ {ECO:0000313|EMBL:AHF00950.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_7911_15
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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15447..15755
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adapter protein ClpS n=4 Tax=Vibrio vulnificus RepID=CLPS_VIBVU
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000255|HAMAP-Rule:MF_00302}; TaxID=196600 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus (strain YJ016).;"
ar4r2_scaffold_7911_16
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15774..18071
DNA (2298bp) protein (766aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7J6_9GAMM rbh
Clp protease ClpX {ECO:0000313|EMBL:KDN95061.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
clpA; ATP-dependent Clp protease ATP-binding protein
ar4r2_scaffold_7911_17
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18081..18401)
DNA (321bp) protein (107aa)
nitrogen regulatory protein P-II n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035F754F
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AAU92976.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ar4r2_scaffold_7911_18
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18416..20059)
DNA (1644bp) protein (548aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZV03_METMM
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEF99436.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Displaying 18 items

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