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ar4r2_scaffold_9638

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_9638_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..848)
DNA (846bp) protein (282aa)
glycoprotease metalloendopeptidase (EC:3.4.24.57) rbh
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TSAD_THICR rbh
ar4r2_scaffold_9638_2
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1051..1266
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=1 Tax=Thiomicrospira halophila RepID=UPI000367BF84
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_9638_3
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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1309..1758
DNA (450bp) protein (150aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DDBF8
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:AKH21513.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
ar4r2_scaffold_9638_4
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1784..3526
DNA (1743bp) protein (581aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037E672D rbh
DNA primase rbh
ar4r2_scaffold_9638_5
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3879..5276
DNA (1398bp) protein (466aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9S2_THICA rbh
RNA polymerase sigma-70 subunit RpoD rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Displaying 5 items

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