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ar4r2_scaffold_2099

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2099_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..322)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036C556D
Ferrous iron transporter {ECO:0000313|EMBL:KDN95816.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
cation diffusion facilitator family transporter
ar4r2_scaffold_2099_2
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

421..1551
DNA (1131bp) protein (377aa)
Uncharacterized conserved protein UCP015557 id=1892918 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
ar4r2_scaffold_2099_3
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1594..2157
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCM9_THICA
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_2099_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2264..3301
DNA (1038bp) protein (346aa)
Hydroxymethylglutaryl-CoA reductase (EC:1.1.1.34) rbh
Hydroxymethylglutaryl-CoA reductase (NADPH) {ECO:0000313|EMBL:AEG32171.1}; EC=1.1.1.34 {ECO:0000313|EMBL:AEG32171.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA40_THICA rbh
ar4r2_scaffold_2099_5
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3298..4332
DNA (1035bp) protein (345aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIK2_NEPCE
ar4r2_scaffold_2099_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4329..5498
DNA (1170bp) protein (390aa)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCH2_9GAMM rbh
3-hydroxy-3-methylglutaryl-CoA synthase
3-hydroxy-3-methylglutaryl-CoA synthase {ECO:0000313|EMBL:AHF01881.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_2099_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5638..6642
DNA (1005bp) protein (335aa)
Mevalonate kinase {ECO:0000313|EMBL:ABB42324.1}; EC=2.7.1.36 {ECO:0000313|EMBL:ABB42324.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Mevalonate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EU9_THICR
GHMP kinase
ar4r2_scaffold_2099_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6639..7568
DNA (930bp) protein (310aa)
Mevalonate kinase {ECO:0000313|EMBL:ABB42325.1}; EC=2.7.1.36 {ECO:0000313|EMBL:ABB42325.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000373BC23
GHMP kinase
ar4r2_scaffold_2099_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7596..8588
DNA (993bp) protein (331aa)
diphosphomevalonate decarboxylase (EC:4.1.1.33) rbh
Diphosphomevalonate decarboxylase id=4098468 bin=GWF2_Lentisphaerae_57_35 species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_2099_10
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..9385)
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TXS4_DESML rbh
ar4r2_scaffold_2099_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9372..10391)
DNA (1020bp) protein (340aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
tRNA-dihydrouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQB4_9GAMM rbh
TIM-barrel protein, yjbN family rbh
ar4r2_scaffold_2099_12
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10425..10766)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KH07_9GAMM
Bsu YqfO NIF3/CutA domain-containing protein {ECO:0000313|EMBL:EMR12740.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
hypothetical protein
ar4r2_scaffold_2099_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10781..11287)
DNA (507bp) protein (169aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ferritin Dps family protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAA6_9GAMM
ferritin
ar4r2_scaffold_2099_14
unknown

Not on your lists

11465..11845
DNA (381bp) protein (127aa)

This feature has no annotations

ar4r2_scaffold_2099_15
unknown

Not on your lists

comp(12105..12236)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 15 items

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