ggKbase home page

ar4r2_scaffold_1756

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1756_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..655)
DNA (654bp) protein (218aa)
Protein HflC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GN7_THICR
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_1756_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(655..1854)
DNA (1200bp) protein (400aa)
HflK protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBQ0_THICA rbh
HflK protein rbh
HflK protein {ECO:0000313|EMBL:AEG31286.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_1756_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1905..3227)
DNA (1323bp) protein (441aa)
GTPase HflX n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GP1_THICR rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
small GTP-binding protein domain-containing protein rbh
ar4r2_scaffold_1756_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3274..3534)
DNA (261bp) protein (87aa)
RNA chaperone Hfq n=1 Tax=Thiomicrospira arctica RepID=UPI00035E2171
host factor Hfq
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1756_5
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3752..4678)
DNA (927bp) protein (309aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003774275
ar4r2_scaffold_1756_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4682..6511)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003627167 rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA mismatch repair protein mutL rbh
ar4r2_scaffold_1756_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..7967)
DNA (1449bp) protein (483aa)
Cell wall hydrolase/autolysin n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD35_9GAMM
cell wall hydrolase
Cell wall hydrolase {ECO:0000313|EMBL:AHF01556.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_1756_8
Vibrio fortis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7988..8344)
DNA (357bp) protein (119aa)
ATPase n=1 Tax=Vibrio genomosp. F6 RepID=UPI0002DA0878
ATPase {ECO:0000313|EMBL:KDN28300.1}; TaxID=212667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fortis.;"
hypothetical protein
ar4r2_scaffold_1756_9
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8462..9601
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
Epoxyqueuosine reductase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JRQ0_9GAMM rbh
iron-sulfur cluster binding protein rbh
ar4r2_scaffold_1756_10
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9666..10619)
DNA (954bp) protein (318aa)
Response regulator receiver modulated CheW protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7X8_9GAMM rbh
Response regulator receiver protein {ECO:0000313|EMBL:KDN95205.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
response regulator receiver
ar4r2_scaffold_1756_11
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10744..11193)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003784F05
hypothetical protein
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
ar4r2_scaffold_1756_12
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..12622)
DNA (1359bp) protein (453aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GP9_THICR rbh
deoxyguanosinetriphosphate triphosphohydrolase-like protein rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_1756_13
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12688..14400
DNA (1713bp) protein (571aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCT2_9GAMM rbh
Displaying 13 items

View Taxonomy