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ar4r2_scaffold_1372_12

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 15872..17431

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037453A8 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 523.0
  • Bit_score: 488
  • Evalue 8.00e-135
  • rbh
sigma-54 (RpoN) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 522.0
  • Bit_score: 474
  • Evalue 3.40e-131
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 522.0
  • Bit_score: 474
  • Evalue 1.70e-130

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Taxonomy

Thiomicrospira crunogena → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGCCATGTTGCCAGGATTACAGTTTAACGTCAGCCAACAGCTTAAGCTCACACCGCAACTGCAACAATCTATCAAGATTTTGCAGCACTCGGCGATTGAGCTACAAGAAGCCATTGGTGAAGCCTTAGACAGTAATATCATGCTCGAATTAGACATGGATGATGCGACGCCTCCCTCAGCGCCAACAGTAAACGACACAGAAAACACTCACGAACTTCATGAAGATTTTGAGTTAAACAATCTCACCGAATTCAATAGCGTCACTAACGATCCCAATATCGATCACATCAACAATTTAACCGACAATCTCGACTGTCAATGGGATGATTTATTCGACAAAGATGGTAACGAATCTCGTGTTGAACACAGTGAATTTGAAGATTTCAGCGTTACCTCGCACCATGACAACGACGACTACACGCCTGCCGAAAGTTATACTGCTGCTCACGAAGACCTTTACAGTCACCTGAAATGGCAAGTTGACACTTTCACTTGGGGTACAGATATTCAACAAGCCATTGCCTACTATCTCATCGACCTGATTGATGAACAAGGCTATTTCAGTAACGATTTAGATCAAGTGATTGAAGCCATTAGCGCCAATGAATCTTTCACACCAGATGAAGATGATGTTGAAACCATATTAACGCTGATTCAAGATAACTTTGACCCGCCTGGGGTTGGCGCTCGCTCCATCCAAGAATGTTTAGTGATTCAACTCAAAGGCATGATACCGCAAACACCGCTGATTCATACCAGCATCAGTATGCTCAGTGAACGCTTCGACTGGTTTGCTCATGGTGACTTTACACGATTAAAACGGGTTTATGGCTTTAATGACCAAAGTTGGTCTGATTTCATGAATCTCATTCAATCACTTAATCCCAAGCCTGGCTTAAGCTTTGCCGACAGTGAACGCGAAGTCATCATTCCTGACCTTATCATTAAACGTGATAAAAAGGGCTGGAAAGTCGAGTTAAATCCCAGCGCCTACCCGCGAGTACGCGTCAATAATGAATATGTCGATTTATTAAAACACCTTGATAAGTCGAGTCGCAGCCAAGAACAAGCCGACGCCATGAAGGAAAAGCTGCTGGAAGCAAGAGGACTGATTAAAAGCATTCAAAGCCGAGGAGAAACGCTACTTAAAGTCGGTGCTTATCTGGTCGCTGAACAAGCGAAATTTTTAGATGAAGGTGATGTTGCCATGAAACCCATGGTGTTACGTGACGTCGCCGATGCTTTAGGGTTACACGAGTCAACGATTTCACGCGCCACCACACAAAAATACATGCAAACACCGCGCGGCACTTATGAACTGAAATACTTTTTTTCCAGTAGCGTTAGCCAGTATGGACCTCAAGATCAATCCGCTGTTGCGATTAAAGCGCGCATTAAACAGCTGATTGATGCTGAAGACCCGAAAAAACCCATCAGCGATCAAGACCTAGTAGACAAGCTCGAAAGCATGAAGATCAGCGTTGCTCGACGCACCGTTGCCAAATACCGTGAGGCCATGGGCATAGGATCATCTTCTCAGCGCAAGGTAAGACGTTAA
PROTEIN sequence
Length: 520
MAMLPGLQFNVSQQLKLTPQLQQSIKILQHSAIELQEAIGEALDSNIMLELDMDDATPPSAPTVNDTENTHELHEDFELNNLTEFNSVTNDPNIDHINNLTDNLDCQWDDLFDKDGNESRVEHSEFEDFSVTSHHDNDDYTPAESYTAAHEDLYSHLKWQVDTFTWGTDIQQAIAYYLIDLIDEQGYFSNDLDQVIEAISANESFTPDEDDVETILTLIQDNFDPPGVGARSIQECLVIQLKGMIPQTPLIHTSISMLSERFDWFAHGDFTRLKRVYGFNDQSWSDFMNLIQSLNPKPGLSFADSEREVIIPDLIIKRDKKGWKVELNPSAYPRVRVNNEYVDLLKHLDKSSRSQEQADAMKEKLLEARGLIKSIQSRGETLLKVGAYLVAEQAKFLDEGDVAMKPMVLRDVADALGLHESTISRATTQKYMQTPRGTYELKYFFSSSVSQYGPQDQSAVAIKARIKQLIDAEDPKKPISDQDLVDKLESMKISVARRTVAKYREAMGIGSSSQRKVRR*