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ar4r2_scaffold_1372

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1372_1
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..3836)
DNA (3834bp) protein (1278aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3) rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCM0_THICA rbh
ar4r2_scaffold_1372_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3836..4927)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000364E6B6
Uncharacterized protein {ECO:0000313|EMBL:KDN96923.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
ar4r2_scaffold_1372_3
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4949..5839)
DNA (891bp) protein (297aa)
dihydrodipicolinate synthase (EC:4.2.1.52) rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RNG1_ALLVD rbh
ar4r2_scaffold_1372_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5921..6610)
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
ABC transporter ATP-binding protein n=1 Tax=Thauera sp. 63 RepID=N6XE23_9RHOO
lipoprotein releasing system, ATP-binding protein
ar4r2_scaffold_1372_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6603..7853)
DNA (1251bp) protein (417aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8J4_THICA rbh
lipoprotein releasing system transmembrane protein LolC/E family rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1372_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7895..8506)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000380CB30
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41766.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_1372_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8647..9939)
DNA (1293bp) protein (431aa)
Sulfide-quinone reductase {ECO:0000313|EMBL:ABB41765.1}; EC=1.-.-.- {ECO:0000313|EMBL:ABB41765.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Sulfide-quinone reductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GF8_THICR rbh
sulfide-quinone reductase rbh
ar4r2_scaffold_1372_8
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10120..13572
DNA (3453bp) protein (1151aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000370D935 rbh
transcription-repair coupling factor rbh
ar4r2_scaffold_1372_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13596..14210
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000370AD41
hypothetical protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1372_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14228..15256
DNA (1029bp) protein (343aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158) rbh
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G34_THICR rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1372_11
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15331..15762)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037F3BD4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41801.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_1372_12
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15872..17431
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037453A8 rbh
sigma-54 (RpoN) rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_1372_13
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17446..18471)
DNA (1026bp) protein (342aa)
Diguanylate cyclase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8A8_9GAMM
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCK82155.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
ar4r2_scaffold_1372_14
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18508..18726)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A4V6_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI58131.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
ar4r2_scaffold_1372_15
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18739..19665)
DNA (927bp) protein (309aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched chain amino acid aminotransferase {ECO:0000313|EMBL:ABB41130.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ABB41130.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Branched chain amino acid aminotransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I93_THICR rbh
ar4r2_scaffold_1372_16
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19906..20451)
DNA (546bp) protein (182aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000255|HAMAP-Rule:MF_00158}; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;"
Pantothenate synthetase n=1 Tax=Pseudomonas putida (strain KT2440) RepID=PANC_PSEPK
Displaying 16 items

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