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ar4r2_scaffold_11333_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 1..1098

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 396.0
  • Bit_score: 231
  • Evalue 1.30e-57
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Idiomarina sp. A28L RepID=F7RVL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 396.0
  • Bit_score: 231
  • Evalue 9.50e-58
23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 373.0
  • Bit_score: 230
  • Evalue 4.60e-58

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Taxonomy

Idiomarina sp. A28L → Idiomarina → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GTTGAGCCTTCTGCACATCGCATTGAGCCAAATTGTGCGCATTTTGGCACTTGCGGTGGCTGTCAGTTACAGCATCTGTCGGTAGATAATCAAGTCGCGTTTAAACAAAATCAGTTGGCTCGTAGTCTGGTTAAGGCGGGTATTGATACCATTAAAACCGAATGGCATGATCCTTTGACAGGCGAGCCTTGGCACTATCGTCGTCGAGCGCGCTGGGCATTGAATCGCCAACACGAATTGTGTTTTCGGTCGGCGGGGGGTAAATATCTGGTGCCGATTCAGGCCTGCCCACAATTATCGCTACCACTCGCTGAATCTCTTGCGCAATTACGTGAAGCCTTGCCTAAGTTACCCTGTCAGGGCGTGGATGAAATCGAATGCTTGGCGATGGGTGAGCAGTCATTGGTGTTACATACCAATCAACATTGGCGTGAACATCAACTGAATGCTTGGCAGGCTTGGTGTGAGCGCGTGGGCATGGCGGGTCTGGCCATTCAAAGCCCAGAACGTGGTGCTTCACTAACTTCGGTTAAGACGGCTAACTTGCATTACGCCTTGGGTGAGTTAACCTTTCATTTTTCGCCTGACCAATTCGTGCAAACCCATGCTCGCGTCAATGAGCAAATGGTGTCTTTAGCGAAAGACTGGTTAGCGGCCAGTGCGGACGACCCAGTATTGGAGTTGTTCTGTGGTATGGGAAATTTCTCATTACCGATTGCGCAAGGCGCAGGCAGTTTACTCGGCTTAGAGTTAAACGAGCAAAGTGTGGCAACCGCCAAAGCCAATGCCATGACCAACGGTATTGTGAATACCGCCTTTGCTCAGGTAGATTTGTTTGCGCCAGATTGGCGTCCGCCAGCGGGTTTAGCCCATGTGTTGCTAGATCCGCCTTGGGATGGTGCGCAAGTGGCTTGTGAACGTATTGCCAAACAAAAGTCGGTGAAGCGTGTGGTGTATGTTTCTTGCCATCCTGCAACCATGGTACGAGATATGGCGGTACTACAGAAAGCAGGTTTCAAGCTGAATAAAATGGCGCTGATCGATCAGTTCCCGCAAAGTTATCATGTTGAGGCGATTGCCTTACTCGTCAGAAGTTGA
PROTEIN sequence
Length: 366
VEPSAHRIEPNCAHFGTCGGCQLQHLSVDNQVAFKQNQLARSLVKAGIDTIKTEWHDPLTGEPWHYRRRARWALNRQHELCFRSAGGKYLVPIQACPQLSLPLAESLAQLREALPKLPCQGVDEIECLAMGEQSLVLHTNQHWREHQLNAWQAWCERVGMAGLAIQSPERGASLTSVKTANLHYALGELTFHFSPDQFVQTHARVNEQMVSLAKDWLAASADDPVLELFCGMGNFSLPIAQGAGSLLGLELNEQSVATAKANAMTNGIVNTAFAQVDLFAPDWRPPAGLAHVLLDPPWDGAQVACERIAKQKSVKRVVYVSCHPATMVRDMAVLQKAGFKLNKMALIDQFPQSYHVEAIALLVRS*