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ar4r2_scaffold_11333

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_11333_1
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1098
DNA (1098bp) protein (366aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Idiomarina sp. A28L RepID=F7RVL7_9GAMM
23S rRNA methyltransferase
ar4r2_scaffold_11333_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1123..1614
DNA (492bp) protein (164aa)
Adenylate cyclase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G23_THICR
adenylate cyclase
CYTH domain protein {ECO:0000313|EMBL:KDN95236.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
ar4r2_scaffold_11333_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1592..2923
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035DA24D
Type I secretion protein TolC {ECO:0000313|EMBL:KDN95235.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Type I secretion outer membrane protein, TolC
ar4r2_scaffold_11333_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2923..4440
DNA (1518bp) protein (506aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCD8_THICA rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDN95234.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
ABC transporter substrate-binding protein rbh
ar4r2_scaffold_11333_5
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4442..4924
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000362259C
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EON93989.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
hypothetical protein
ar4r2_scaffold_11333_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4921..5850
DNA (930bp) protein (310aa)
ATP-binding cassette superfamily transporter, permease component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G29_THICR rbh
binding-protein dependent transport system inner membrane protein rbh
ATP-binding cassette superfamily transporter, permease component {ECO:0000313|EMBL:ABB41894.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_11333_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5847..6638
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003606A69 rbh
ABC transporter permease {ECO:0000313|EMBL:KDN95230.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
binding-protein dependent transport system inner membrane protein rbh
ar4r2_scaffold_11333_8
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6625..7728
DNA (1104bp) protein (368aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003639689 rbh
glycoside hydrolase rbh
ar4r2_scaffold_11333_9
Rickettsia felis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7721..7849
DNA (129bp) protein (43aa)
Possible DNA primase n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4ULD6_RICFE
traC; DNA primase
Possible DNA primase {ECO:0000313|EMBL:AAY61637.1}; TaxID=315456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi).;"
Displaying 9 items

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