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ar4r2_scaffold_532

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_532_1

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1..1815
DNA (1815bp) protein (605aa)
seg 2..33 id=50971 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28139.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_532_2
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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2032..2436
DNA (405bp) protein (135aa)
DNA mismatch repair protein MutS n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5J2G7_9FIRM
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CCY46804.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
ar4r2_scaffold_532_3
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

2817..3167
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGI8_9BACT
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_532_4
GWF1_OD1_36_78, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3172..4329
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJA3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKQ12749.1}; TaxID=1618718 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_36_78.;"
hypothetical protein rbh
ar4r2_scaffold_532_5

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4648..4986
DNA (339bp) protein (113aa)
seg 79..90 id=69272 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65803.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_6

Not on your lists

4989..5726
DNA (738bp) protein (246aa)
hypothetical protein; K09761 ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-] id=69618 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Ribosomal RNA small subunit methyltransferase E
ar4r2_scaffold_532_7

Not on your lists

5768..6385
DNA (618bp) protein (206aa)
exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=123326 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29352.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Exonuclease RNase T and DNA polymerase III
ar4r2_scaffold_532_8
CG_GN02-01, Gracilibacteria, Bacteria

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6398..6628
DNA (231bp) protein (77aa)
seg 15..20 id=123916 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-01
ar4r2_scaffold_532_9

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6692..7678
DNA (987bp) protein (329aa)
zmo:ZMO1166 recA; recombinase A (EC:3.6.3.8); K03553 recombination protein RecA id=123676 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recA; recombinase A
ar4r2_scaffold_532_10

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comp(7705..9747)
DNA (2043bp) protein (681aa)
set:SEN3417 prlC; oligopeptidase A (EC:3.4.24.70); K01414 oligopeptidase A [EC:3.4.24.70] id=35152 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
prlC; oligopeptidase A (EC:3.4.24.70) rbh
Oligopeptidase A {ECO:0000313|EMBL:EKE28954.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_11
unknown

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comp(9753..10790)
DNA (1038bp) protein (346aa)

This feature has no annotations

ar4r2_scaffold_532_12

Not on your lists

comp(10801..11253)
DNA (453bp) protein (151aa)
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase {ECO:0000256|SAAS:SAAS00094203}; EC=2.1.1.177 {ECO:0000256|SAAS:SAAS00094203};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GDM6_9BACT
Ribosomal RNA large subunit methyltransferase H
ar4r2_scaffold_532_13

Not on your lists

comp(11255..12223)
DNA (969bp) protein (323aa)
seg 84..106 id=68594 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66786.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_14
ACD2, Gracilibacteria, Bacteria

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comp(12345..12527)
DNA (183bp) protein (61aa)
Ribosomal_L33 12..52 id=34738 bin=ACD2 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD2
ar4r2_scaffold_532_15

Not on your lists

12699..13301
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44510.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_16
unknown

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13367..13804
DNA (438bp) protein (146aa)

This feature has no annotations

ar4r2_scaffold_532_17

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13824..14183
DNA (360bp) protein (120aa)
transmembrane_regions 9..26 id=123379 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30043.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_18

Not on your lists

14185..14544
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30342.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_532_19
unknown

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14560..14955
DNA (396bp) protein (132aa)

This feature has no annotations

ar4r2_scaffold_532_20
CG_GN02-02, Gracilibacteria, Bacteria

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14960..15883
DNA (924bp) protein (308aa)
Metalloproteases ("zincins"), catalytic domain id=123381 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_532_21

Not on your lists

16263..18230
DNA (1968bp) protein (656aa)
Beta-lactamase protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGE0_9BACT rbh
Beta-lactamase protein {ECO:0000313|EMBL:EKE29479.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_532_22
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

18431..18703
DNA (273bp) protein (91aa)
hupB1; DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta id=124548 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Bacterial nucleoid DNA-binding protein
Tax=CG_GN02-02
ar4r2_scaffold_532_23
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

18826..19377
DNA (552bp) protein (184aa)
ATPase-like, ATP-binding domain 30..171 id=124545 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-02
ar4r2_scaffold_532_24
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(19433..20029)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXJ8_BACS4 id=123746 bin=ACD78 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L25
Tax=ACD78
ar4r2_scaffold_532_25

Not on your lists

20207..21142
DNA (936bp) protein (312aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BD65_9BACT
murB1; UDP-N-acetylenolpyruvoylglucosamine reductase
ar4r2_scaffold_532_26
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

21171..22124
DNA (954bp) protein (318aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFM2_9CLOT
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
ar4r2_scaffold_532_27

Not on your lists

22143..23156
DNA (1014bp) protein (338aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BAP8_9BACT rbh
ar4r2_scaffold_532_28
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

23165..25009
DNA (1845bp) protein (615aa)
DNA mismatch repair protein MutL n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RP69_9CLOT rbh
Mismatch repair protein MutL protein {ECO:0000313|EMBL:KKR04431.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
DNA mismatch repair protein mutL rbh
ar4r2_scaffold_532_29
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


25192..25659
DNA (468bp) protein (156aa)
50S ribosomal protein L11 n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036691ED
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
50S ribosomal protein L11
ar4r2_scaffold_532_trna_1
unknown

Not on your lists

25699..25771
DNA (73bp)
transferRNA Glu
Displaying items 1-30 of 35 in total

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