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ar4r2_scaffold_566

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_566_1
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ar4r2_scaffold_566_2

Not on your lists

comp(580..1032)
DNA (453bp) protein (151aa)
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase {ECO:0000256|SAAS:SAAS00094203}; EC=2.1.1.177 {ECO:0000256|SAAS:SAAS00094203};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
protein of unknown function DUF163; K00783 hypothetical protein id=50588 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Ribosomal RNA large subunit methyltransferase H
ar4r2_scaffold_566_3

Not on your lists

comp(1245..1652)
DNA (408bp) protein (136aa)
hypothetical protein id=123306 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30329.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_566_4
unknown

Not on your lists

comp(1745..1948)
DNA (204bp) protein (68aa)

This feature has no annotations

ar4r2_scaffold_566_5
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

comp(2013..2948)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003794A85
hypothetical protein
Tax=CG_Verruco_01
ar4r2_scaffold_566_6
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

comp(2932..3900)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036F6745
Uncharacterized protein {ECO:0000313|EMBL:KKT35475.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
von Willebrand factor type A
ar4r2_scaffold_566_7
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(4273..5265)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU13_9BACT id=124547 bin=ACD78 species=Alistipes putredinis genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=ACD78
ar4r2_scaffold_566_8
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5385..6353)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036278B6
BatD protein {ECO:0000313|EMBL:KGO85698.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
ar4r2_scaffold_566_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6380..7225)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT50_9BACT id=68740 bin=ACD49 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=CG_GN02-01
ar4r2_scaffold_566_10

Not on your lists

comp(7634..8587)
DNA (954bp) protein (318aa)
cts:Ctha_0694 ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] id=68874 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66136.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ATPase rbh
ar4r2_scaffold_566_11
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8693..9271)
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
sodB; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MTZ5_PROHU
ar4r2_scaffold_566_12

Not on your lists

comp(9540..11075)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44555.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RHS repeat-associated core domain-containing protein
ar4r2_scaffold_566_13
unknown

Not on your lists

comp(11079..11444)
DNA (366bp) protein (122aa)

This feature has no annotations

ar4r2_scaffold_566_14

Not on your lists

comp(11450..13066)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44555.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
YD repeat-containing protein
ar4r2_scaffold_566_15

Not on your lists

comp(13216..18300)
DNA (5085bp) protein (1695aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44555.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RHS repeat-associated core domain-containing protein rbh
ar4r2_scaffold_566_16

Not on your lists

19205..19945
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GT66_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26555.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_566_17
unknown

Not on your lists

comp(19942..20466)
DNA (525bp) protein (175aa)

This feature has no annotations

ar4r2_scaffold_566_18

Not on your lists

20549..21688
DNA (1140bp) protein (380aa)
DNA repair photolyase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0T6_9FIRM id=35371 bin=ACD2 species=Butyrivibrio crossotus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Spore photoproduct lyase {ECO:0000313|EMBL:EKE26552.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA repair photolyase
ar4r2_scaffold_566_19
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

21748..22107
DNA (360bp) protein (120aa)
excinuclease ABC subunit C; K07461 putative endonuclease id=15189158 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
excinuclease ABC subunit C
Tax=GWE1_Berkelbacteria_39_12
ar4r2_scaffold_566_20

Not on your lists

22569..23171
DNA (603bp) protein (201aa)
UPI0003D006BF related cluster n=1 Tax=unknown RepID=UPI0003D006BF
Short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EKE27994.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_566_21

Not on your lists

23235..23888
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44510.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_566_22

Not on your lists

comp(24126..24320)
DNA (195bp) protein (65aa)
hypothetical protein id=124036 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29655.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_566_23
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(24379..26259)
DNA (1881bp) protein (627aa)
cbf:CLI_3016 lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=123591 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
lepA; ribosomal elongation factor, GTPase rbh
Tax=CG_GN02-02
ar4r2_scaffold_566_24
unknown

Not on your lists

26425..27300
DNA (876bp) protein (292aa)

This feature has no annotations

ar4r2_scaffold_566_25

Not on your lists

27377..28462
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XY77_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30092.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
twitching motility protein rbh
ar4r2_scaffold_566_26

Not on your lists


comp(28511..29782)
DNA (1272bp) protein (424aa)
preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY id=123927 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Protein translocase subunit SecY
ar4r2_scaffold_566_27

Not on your lists


comp(29847..30305)
DNA (459bp) protein (153aa)
50S ribosomal protein L15 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XW99_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
50S ribosomal protein L15
ar4r2_scaffold_566_28
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists


comp(30336..30830)
DNA (495bp) protein (165aa)
Ribosomal protein S5 n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=D6HS23_9FIRM id=124488 bin=ACD78 species=Erysipelotrichaceae bacterium 5_2_54FAA genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_566_29
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30853..31194)
DNA (342bp) protein (114aa)
50S ribosomal protein L18 n=2 Tax=Geobacter metallireducens RepID=RL18_GEOMG
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
ar4r2_scaffold_566_30

Not on your lists


comp(31292..31831)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YW87_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rplF; 50S ribosomal protein L6
Displaying items 1-30 of 49 in total

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