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ar4r2_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_376_1
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..506
DNA (504bp) protein (168aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
ar4r2_scaffold_376_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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601..4137
DNA (3537bp) protein (1179aa)
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPP4_9SPHI
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) {ECO:0000313|EMBL:EFK57891.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
PARCEL domain-containing protein
ar4r2_scaffold_376_3
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4234..5712
DNA (1479bp) protein (493aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=520999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia alcalifaciens DSM 30120.;"
tRNA sulfurtransferase n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XA68_9ENTR rbh
thiI; thiamine biosynthesis protein ThiI rbh
ar4r2_scaffold_376_4

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comp(5763..5978)
DNA (216bp) protein (72aa)
Ribosomal protein S18 n=1 Tax=sediment metagenome RepID=D9PJ92_9ZZZZ
Ribosomal protein S18 {ECO:0000313|EMBL:EFK96369.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rpsR; 30S ribosomal protein S18
ar4r2_scaffold_376_5
CG_GN02-01, Gracilibacteria, Bacteria

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comp(6001..6399)
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ04_9BACT
hypothetical protein
Tax=CG_GN02-01
ar4r2_scaffold_376_6
ACD78, Gracilibacteria, Bacteria

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comp(6428..6712)
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIN4_9BACT
rpsF; SSU ribosomal protein S6P
Tax=ACD78
ar4r2_scaffold_376_7

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6941..7840
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFP6_9BACT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
GTPase Era
ar4r2_scaffold_376_8

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comp(7857..8285)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F495_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE25961.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Crp/Fnr family transcriptional regulator
ar4r2_scaffold_376_9

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comp(8309..10777)
DNA (2469bp) protein (823aa)
Translation initiation factor IF-2 n=1 Tax=uncultured bacterium RepID=K2E0L5_9BACT rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation initiation factor IF-2
ar4r2_scaffold_376_10

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10919..11407
DNA (489bp) protein (163aa)
RNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FTR9_9BACT
RNA-binding protein {ECO:0000313|EMBL:EKE26323.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
R3H domain protein
ar4r2_scaffold_376_11

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11494..12627
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUZ9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66059.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_376_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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12641..13075
DNA (435bp) protein (145aa)
transmembrane_regions 5..24 id=73903 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ar4r2_scaffold_376_13
CG_GN02-02, Gracilibacteria, Bacteria

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13104..13445
DNA (342bp) protein (114aa)
transmembrane_regions 9..26 id=123379 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-02
ar4r2_scaffold_376_14
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

13451..13801
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYV3_9BACT
Tax=CG_GN02-02
ar4r2_scaffold_376_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13830..14255)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVQ1_9BACT
Tax=CG_GN02-01
ar4r2_scaffold_376_16

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comp(14272..15162)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G051_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE27527.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_376_17
ACD78, Gracilibacteria, Bacteria

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comp(15168..16160)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWI1_9BACT
Tax=ACD78
ar4r2_scaffold_376_18

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comp(16170..19025)
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF61_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD47636.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_376_trna_1
unknown

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19253..19325
DNA (73bp)
transferRNA Lys
ar4r2_scaffold_376_19
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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19455..19802
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKX6_MARHT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
ar4r2_scaffold_376_20
unknown

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comp(19843..20148)
DNA (306bp) protein (102aa)

This feature has no annotations

ar4r2_scaffold_376_21
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(20161..20766)
DNA (606bp) protein (202aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=131430 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
HAD family hydrolase
Tax=CG_Elusi_05
ar4r2_scaffold_376_22

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comp(20769..21239)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ46_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30221.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_376_23

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comp(21363..21815)
DNA (453bp) protein (151aa)
AP4A hydrolase id=123837 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
AP4A hydrolase {ECO:0000313|EMBL:EKD30222.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycosyl transferase, group 1
ar4r2_scaffold_376_24
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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21967..23133
DNA (1167bp) protein (389aa)
mdh; malate dehydrogenase (EC:1.1.1.38) rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ED60_9BACT rbh
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ar4r2_scaffold_376_25
ACD78, Gracilibacteria, Bacteria

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comp(23156..24808)
DNA (1653bp) protein (551aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSU7_9BACT id=123402 bin=ACD78 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Cna protein B-type domain-containing protein
Tax=ACD78
ar4r2_scaffold_376_26

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comp(24921..25583)
DNA (663bp) protein (221aa)
seg 14..29 id=124093 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30183.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_376_27
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


25752..28325
DNA (2574bp) protein (858aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) rbh
DNA gyrase, A subunit n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGF4_9BACT rbh
Tax=CG_GN02-01
ar4r2_scaffold_376_28
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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28555..29922
DNA (1368bp) protein (456aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) rbh
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGL62221.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AGL62221.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYD9_9BACT rbh
ar4r2_scaffold_376_29

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30579..32324
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C212_9FLAO id=983184 bin=RAAC1_SR1 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1
hypothetical protein
Mtultidrug ABC transporter permease/ATPase {ECO:0000313|EMBL:EKE27406.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying items 1-30 of 36 in total

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