ggKbase home page

ar4r2_scaffold_2520

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2520_1
unknown

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

ar4r2_scaffold_2520_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285..3647
DNA (3363bp) protein (1121aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI0003797DC9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55221.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2520_trna_1
unknown

Not on your lists

3772..3844
DNA (73bp)
transferRNA Thr
ar4r2_scaffold_2520_3

Not on your lists

comp(3919..5574)
DNA (1656bp) protein (552aa)
UPI0003CF9DF6 related cluster n=1 Tax=unknown RepID=UPI0003CF9DF6 rbh
hypothetical protein
Resolvase-like protein {ECO:0000313|EMBL:EKD25081.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_2520_4
unknown

Not on your lists

6168..6596
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=983262 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_5
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

6624..7847
DNA (1224bp) protein (408aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
hypothetical protein
ipo:Ilyop_1048 DNA methylase N-4/N-6 domain-containing protein id=983265 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ar4r2_scaffold_2520_6
unknown

Not on your lists

7847..8338
DNA (492bp) protein (164aa)
hypothetical protein
hypothetical protein id=983268 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_7
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8331..9821
DNA (1491bp) protein (497aa)
hypothetical protein
hypothetical protein id=983269 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADE38620.1}; TaxID=488538 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Puniceispirillum.;" source="Puniceispirillum marinum (strain IMCC1322).;"
ar4r2_scaffold_2520_8
unknown

Not on your lists

9880..11355
DNA (1476bp) protein (492aa)
hypothetical protein
coiled-coil 358..379 id=983274 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ar4r2_scaffold_2520_9
unknown

Not on your lists

11519..12154
DNA (636bp) protein (212aa)
hypothetical protein
coiled-coil 50..90 id=983275 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ar4r2_scaffold_2520_10
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

12198..13361
DNA (1164bp) protein (388aa)
phage protein
phage protein id=983276 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Phage protein {ECO:0000313|EMBL:ADU95999.1}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
ar4r2_scaffold_2520_11
unknown

Not on your lists

13389..13715
DNA (327bp) protein (109aa)
hypothetical protein
seg 7..47 id=983277 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_12
unknown

Not on your lists

13741..13929
DNA (189bp) protein (63aa)
hypothetical protein
hypothetical protein id=983278 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_13
unknown

Not on your lists

14031..14465
DNA (435bp) protein (145aa)
hypothetical protein
source missing description 5..107 id=983279 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_14
unknown

Not on your lists

14488..14790
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein id=983280 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_15
unknown

Not on your lists

14790..15290
DNA (501bp) protein (167aa)
hypothetical protein
seg 28..39 id=983281 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ar4r2_scaffold_2520_16
unknown

Not on your lists

15263..15703
DNA (441bp) protein (147aa)
hypothetical protein
seg 2..17 id=983282 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_17
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

15777..16547
DNA (771bp) protein (257aa)
hypothetical protein
seg 58..70 id=983283 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Tax=RBG_13_Actinobacteria_35_12_curated
ar4r2_scaffold_2520_18
unknown

Not on your lists

16593..16958
DNA (366bp) protein (122aa)
hypothetical protein
hypothetical protein id=983284 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_2520_19
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

comp(17208..17699)
DNA (492bp) protein (164aa)
6-pyruvoyl-tetrahydropterin synthase n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D527_9BACT
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:ERP30671.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" source="Chitinivibrio alkaliphilus ACht1.;"
hypothetical protein
ar4r2_scaffold_2520_20
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(17948..18337)
DNA (390bp) protein (130aa)
Transposase IS200-family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7A8_9CLOT
transposase IS200-family protein
Tax=CG_GN02-02
Displaying 21 items

View Taxonomy