ggKbase home page

ar4r2_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_328_1
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1734)
DNA (1734bp) protein (578aa)
Protein serine/threonine phosphatase id=4905524 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Stage II sporulation protein E (SpoIIE)
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_328_2
unknown

Not on your lists

comp(1853..2320)
DNA (468bp) protein (156aa)

This feature has no annotations

ar4r2_scaffold_328_3
unknown

Not on your lists

comp(2347..3393)
DNA (1047bp) protein (349aa)

This feature has no annotations

ar4r2_scaffold_328_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(3484..5109)
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IA85_METB6
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
ar4r2_scaffold_328_5

Not on your lists

comp(5878..6108)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037A481B
Uncharacterized protein {ECO:0000313|EMBL:EKD25647.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_6

Not on your lists

comp(6227..7168)
DNA (942bp) protein (314aa)
Holliday junction ATP-dependent DNA helicase ruvB n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEA3_9PROT id=132645 bin=ACD80 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=ACD80 organism_group=SR1 rbh
Holliday junction ATP-dependent DNA helicase ruvB {ECO:0000313|EMBL:EKD25646.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Holliday junction ATP-dependent DNA helicase RuvB
ar4r2_scaffold_328_7

Not on your lists

comp(7168..7572)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI000376ECF6
Uncharacterized protein {ECO:0000313|EMBL:EKD25645.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_8

Not on your lists

comp(7661..9400)
DNA (1740bp) protein (580aa)
Subtilisin-like protein serine protease n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YK48_9BACT rbh
Subtilisin-like protein serine protease {ECO:0000313|EMBL:EKD25644.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_9

Not on your lists

9553..10056
DNA (504bp) protein (168aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=132647 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25643.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_10

Not on your lists


10170..10409
DNA (240bp) protein (80aa)
seg 73..82 id=132646 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_11

Not on your lists

10486..11121
DNA (636bp) protein (212aa)
transmembrane_regions 25..47 id=132643 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25641.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_12

Not on your lists

comp(11234..12481)
DNA (1248bp) protein (416aa)
seg 285..299 id=131915 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25583.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_13

Not on your lists

12780..13223
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XKA8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD25582.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_14
R_OD1_Nomurabacteria_39_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13335..14438)
DNA (1104bp) protein (368aa)
Uncharacterized conserved protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N355_SLAHD
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_9_curated
ar4r2_scaffold_328_15

Not on your lists

comp(14591..15964)
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P9M3_BACCO id=131978 bin=ACD80 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:EKD25579.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramate-L-alanine ligase
ar4r2_scaffold_328_16
unknown

Not on your lists

comp(15955..16059)
DNA (105bp) protein (35aa)

This feature has no annotations

ar4r2_scaffold_328_17
ACD80, SR1, Bacteria

Not on your lists

16104..16745
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037E82F6
Tax=ACD80
ar4r2_scaffold_328_trna_4
unknown

Not on your lists

comp(16838..16921)
DNA (84bp)
transferRNA Leu
ar4r2_scaffold_328_18

Not on your lists

17247..17651
DNA (405bp) protein (135aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=131976 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_19

Not on your lists

17772..18359
DNA (588bp) protein (196aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Signal peptidase I n=1 Tax=Staphylococcus aureus RepID=D2JDA6_STAAU id=131975 bin=ACD80 species=Staphylococcus aureus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
hypothetical protein
ar4r2_scaffold_328_20

Not on your lists

18396..19061
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ18_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD25573.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_21

Not on your lists

19093..19446
DNA (354bp) protein (118aa)
HSP20-like chaperones id=131931 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25572.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_22

Not on your lists

comp(19528..20853)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XK30_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25571.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_23
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20946..21830
DNA (885bp) protein (295aa)
hypothetical protein
Nucleotide-diphospho-sugar transferases 3..274 id=982284 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Glycosyl transferase {ECO:0000313|EMBL:AHA97493.1}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
ar4r2_scaffold_328_24

Not on your lists

comp(21869..22897)
DNA (1029bp) protein (343aa)
seg 83..98 id=131927 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25611.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_25

Not on your lists

comp(23039..25669)
DNA (2631bp) protein (877aa)
coiled-coil 120..141 id=131951 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25610.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_26

Not on your lists

comp(25885..26484)
DNA (600bp) protein (200aa)
seg 56..67 id=131941 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25609.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_328_27
unknown

Not on your lists

comp(26469..26918)
DNA (450bp) protein (150aa)

This feature has no annotations

ar4r2_scaffold_328_trna_1
unknown

Not on your lists

26739..26825
DNA (87bp)
transferRNA Ser
ar4r2_scaffold_328_trna_2
unknown

Not on your lists

26835..26908
DNA (74bp)
transferRNA Met
Displaying items 1-30 of 50 in total

View Taxonomy