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AMDSBA4_7

Alias: AMDSBA4_C6

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Displaying items 1-30 of 174 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_7_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

957..2198
DNA (1242bp) protein (414aa)
snt-5; sugar phosphate nucleotidyl transferase (EC:2.7.7.-); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] (db=KEGG evalue=4.0e-16 bit_score=91.3 identity=24.6 coverage=78.01932367149759)
Sugar phosphate nucleotidyl transferase n=2 Tax=Thermoproteus tenax RepID=G4RNW5_THETK (db=UNIREF evalue=5.2e-16 bit_score=91.3 identity=24.6 coverage=78.01932367149759)
seg (db=Seg db_id=seg from=137 to=152)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=5 to=346 evalue=4.4e-39)
AMDSBA4_7_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2195..3352)
DNA (1158bp) protein (386aa)
hypothetical protein
hypothetical protein
YueF n=2 Tax=Sulfobacillus acidophilus RepID=F8I362_SULAT (db=UNIREF evalue=1.4e-119 bit_score=435.3 identity=58.8 coverage=94.04145077720207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
AMDSBA4_7_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3658..5127
DNA (1470bp) protein (490aa)
integral membrane protein MviN
integral membrane protein MviN
Integral membrane protein MviN n=2 Tax=Sulfobacillus acidophilus RepID=G8TUW7_9FIRM (db=UNIREF evalue=6.8e-172 bit_score=609.4 identity=61.6 coverage=97.95918367346938)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA4_7_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5180..6628
DNA (1449bp) protein (483aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Putative uncharacterized protein (Fragment) n=1 Tax=Nematocida sp. 1 ERTm2 RepID=H8ZED3_NEMS1 (db=UNIREF evalue=2.8e-53 bit_score=215.3 identity=31.5 coverage=89.44099378881988)
(db=HMMPfam db_id=PF00982 from=10 to=472 evalue=9.5e-122 interpro_id=IPR001830 interpro_description=Glycosyl transferase, family 20 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: trehalose biosynthetic process (GO:0005992))
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=8 to=478 evalue=1.2e-121)
AMDSBA4_7_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6615..7403
DNA (789bp) protein (263aa)
trehalose 6-phosphatase (EC:3.1.3.12)
Trehalose-phosphatase n=1 Tax=Desulfobulbus propionicus DSM 2032 RepID=E8RE17_DESPD (db=UNIREF evalue=2.9e-12 bit_score=78.2 identity=30.2 coverage=88.59315589353612)
seg (db=Seg db_id=seg from=46 to=60)
HAD-like (db=superfamily db_id=SSF56784 from=23 to=259 evalue=1.7e-37 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA4_7_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7400..9295)
DNA (1896bp) protein (632aa)
methionine synthase (EC:1.5.1.20 2.1.1.13)
methionine synthase (EC:1.5.1.20 2.1.1.13)
Methylenetetrahydrofolate reductase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSS6_9FIRM (db=UNIREF evalue=6.6e-212 bit_score=742.7 identity=59.9 coverage=97.31012658227847)
AMDSBA4_7_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9295..10281)
DNA (987bp) protein (329aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSS5_9FIRM (db=UNIREF evalue=1.9e-138 bit_score=497.7 identity=75.6 coverage=98.78419452887537)
AMDSBA4_7_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10284..11276)
DNA (993bp) protein (331aa)
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSS4_9FIRM (db=UNIREF evalue=5.4e-88 bit_score=330.1 identity=52.2 coverage=95.46827794561933)
AMDSBA4_7_9
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

12609..13346
DNA (738bp) protein (246aa)
TOBE domain family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IEC6_ACIB4 (db=UNIREF evalue=1.4e-13 bit_score=82.4 identity=23.2 coverage=82.52032520325203)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=220 evalue=3.9e-55)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=7 to=209 evalue=4.0e-49)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=221 evalue=3.6e-44)
AMDSBA4_7_10
unknown

Not on your lists

13339..14859
DNA (1521bp) protein (507aa)
seg (db=Seg db_id=seg from=400 to=416)
seg (db=Seg db_id=seg from=323 to=341)
seg (db=Seg db_id=seg from=74 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=464 to=486)
AMDSBA4_7_11
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15410..15949
DNA (540bp) protein (180aa)
transcriptional regulator protein-like protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=143 evalue=1.1e-20)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=3 to=86 evalue=1.8e-18 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
(db=HMMPfam db_id=PF01047 from=38 to=81 evalue=2.7e-11 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA4_7_12
unknown

Not on your lists

15953..16372
DNA (420bp) protein (140aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=112)
seg (db=Seg db_id=seg from=84 to=95)
AMDSBA4_7_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16855..17142
DNA (288bp) protein (96aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
seg (db=Seg db_id=seg from=35 to=44)
Uncharacterized protein {ECO:0000313|EMBL:AEW05845.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
AMDSBA4_7_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17201..17866)
DNA (666bp) protein (222aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVC7_9FIRM (db=UNIREF evalue=2.0e-78 bit_score=297.7 identity=65.6 coverage=99.09909909909909)
seg (db=Seg db_id=seg from=46 to=62)
seg (db=Seg db_id=seg from=69 to=82)
AMDSBA4_7_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18006..18389
DNA (384bp) protein (128aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=root RepID=B5EJX6_ACIF5 (db=UNIREF evalue=1.1e-09 bit_score=68.6 identity=35.2 coverage=97.65625)
Uncharacterized protein {ECO:0000313|EMBL:AEW05847.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I354_SULAT
AMDSBA4_7_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18452..19606
DNA (1155bp) protein (385aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cystathionine beta-lyase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2U4_COMTE (db=UNIREF evalue=2.1e-51 bit_score=208.8 identity=34.3 coverage=96.62337662337663)
CYSTATHIONINE GAMMA-LYASE (GAMMA-CYSTATHIONASE) (db=HMMPanther db_id=PTHR11808:SF15 from=85 to=383 evalue=1.7e-134)
seg (db=Seg db_id=seg from=370 to=382)
AMDSBA4_7_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19626..20780
DNA (1155bp) protein (385aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD0_9FIRM (db=UNIREF evalue=2.9e-141 bit_score=507.3 identity=67.9 coverage=96.1038961038961)
seg (db=Seg db_id=seg from=79 to=90)
AMDSBA4_7_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20782..22248)
DNA (1467bp) protein (489aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD1_9FIRM (db=UNIREF evalue=1.5e-182 bit_score=644.8 identity=64.4 coverage=99.18200408997954)
AMDSBA4_7_19
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22592..23359)
DNA (768bp) protein (256aa)
tyrosine protein phosphatase
Capsular polysaccharide biosynthesis protein n=2 Tax=Oenococcus oeni RepID=A0NKF6_OENOE (db=UNIREF evalue=3.5e-18 bit_score=97.8 identity=23.2 coverage=92.96875)
seg (db=Seg db_id=seg from=58 to=70)
seg (db=Seg db_id=seg from=158 to=169)
AMDSBA4_7_20
Exiguobacterium sp. RIT341, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23356..24057)
DNA (702bp) protein (234aa)
tyrosine protein kinase
Capsular exopolysaccharide family n=3 Tax=Paenibacillus RepID=F3M514_9BACL (db=UNIREF evalue=9.8e-44 bit_score=182.6 identity=44.4 coverage=91.45299145299145)
seg (db=Seg db_id=seg from=220 to=233)
eps_fam: capsular exopolysaccharide family (db=HMMTigr db_id=TIGR01007 from=25 to=227 evalue=1.8e-65 interpro_id=IPR005702 interpro_description=Exopolysaccharide synthesis protein GO=Molecular Function: enzyme regulator activity (GO:0030234), Biological Process: capsule polysaccharide biosynthetic process (GO:0045227))
AMDSBA4_7_21
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24061..24825)
DNA (765bp) protein (255aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=169 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=190)
seg (db=Seg db_id=seg from=16 to=27)
AMDSBA4_7_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24924..25937)
DNA (1014bp) protein (338aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycoside hydrolase family 18 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD4_9FIRM (db=UNIREF evalue=1.8e-123 bit_score=448.0 identity=65.0 coverage=95.85798816568047)
AMDSBA4_7_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26013..27275)
DNA (1263bp) protein (421aa)
cell envelope-related transcriptional attenuator rbh
Cell envelope-related transcriptional attenuator n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD5_9FIRM (db=UNIREF evalue=6.2e-174 bit_score=615.9 identity=73.8 coverage=99.04988123515439)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=10 to=32)
AMDSBA4_7_24
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27505..28263
DNA (759bp) protein (253aa)
metallo-beta-lactamase family protein
Putative N-acyl homoserine lactone hydrolase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W799_9ACTO (db=UNIREF evalue=1.8e-14 bit_score=85.5 identity=36.8 coverage=57.70750988142292)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=26 to=251 evalue=1.1e-35)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=236 evalue=4.3e-29)
AMDSBA4_7_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28275..28994
DNA (720bp) protein (240aa)
sgtA; penicillin-binding protein
Penicillin-binding protein 1A n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YMC8_LYNSP (db=UNIREF evalue=1.1e-29 bit_score=136.0 identity=40.2 coverage=75.83333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
(db=HMMPfam db_id=PF00912 from=49 to=214 evalue=1.4e-53 interpro_id=IPR001264 interpro_description=Glycosyl transferase, family 51 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Cellular Component: peptidoglycan-based cell wall (GO:0009274))
AMDSBA4_7_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29083..29865)
DNA (783bp) protein (261aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=2 Tax=Sulfobacillus acidophilus RepID=G8TVE7_9FIRM (db=UNIREF evalue=1.6e-127 bit_score=461.1 identity=89.6 coverage=99.23371647509579)
GTP-sensing pleiotropic transcriptional repressor CodY
GTP-sensing pleiotropic transcriptional repressor CodY
AMDSBA4_7_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29970..31376)
DNA (1407bp) protein (469aa)
hslU; heat shock protein HslVU, ATPase subunit HslU
hslU; heat shock protein HslVU, ATPase subunit HslU
ATP-dependent protease ATPase subunit ClpY n=19 Tax=Bacillus RepID=CLPY_BACA2 (db=UNIREF evalue=1.1e-150 bit_score=538.9 identity=59.7 coverage=99.36034115138592)
AMDSBA4_7_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31389..31937)
DNA (549bp) protein (183aa)
ATP dependent peptidase subunit CodW
ATP-dependent protease subunit HslV n=3 Tax=Acidiphilium RepID=HSLV_ACICJ (db=UNIREF evalue=3.9e-48 bit_score=196.8 identity=56.2 coverage=94.53551912568307)
seg (db=Seg db_id=seg from=129 to=147)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=9 to=182 evalue=5.3e-47)
AMDSBA4_7_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31958..32857)
DNA (900bp) protein (300aa)
tyrosine recombinase XerC
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=103 to=292 evalue=8.4e-56 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=108 to=288 evalue=2.5e-51 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
(db=HMMPfam db_id=PF00589 from=108 to=281 evalue=2.6e-41 interpro_id=IPR002104 interpro_description=Integrase, catalytic GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
AMDSBA4_7_30
unknown

Not on your lists

comp(32841..33026)
DNA (186bp) protein (62aa)
seg (db=Seg db_id=seg from=32 to=47)
Displaying items 1-30 of 174 in total

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