name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
AMDSBA4_17_1
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3..170)
|
Composite domain of metallo-dependent hydrolases (db=superfamily db_id=SSF51338 from=1 to=56 evalue=2.1e-09 interpro_id=IPR011059 interpro_description=Metal-dependent hydrolase, composite domain GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
no description (db=Gene3D db_id=G3DSA:2.30.40.10 from=2 to=55 evalue=0.00043)
allB; allantoinase (EC:3.5.2.5)
Allantoinase {ECO:0000313|EMBL:ABB14968.1}; EC=3.5.2.5 {ECO:0000313|EMBL:ABB14968.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxyd
|
|
AMDSBA4_17_2
unknown
|
Not on your lists |
233..520
|
seg (db=Seg db_id=seg from=38 to=50)
|
|
AMDSBA4_17_3
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
536..1117
|
isochorismatase
Isochorismatase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNF5_9BACI (db=UNIREF evalue=1.3e-44 bit_score=185.3 identity=48.9 coverage=95.87628865979381)
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=1 to=169 evalue=2.9e-46 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=2 to=168 evalue=4.4e-45 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
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AMDSBA4_17_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1386..2636)
|
glyA; glycine hydroxymethyltransferase
glyA; glycine hydroxymethyltransferase
Serine hydroxymethyltransferase 2 n=2 Tax=Photobacterium profundum RepID=GLYA2_PHOPR (db=UNIREF evalue=1.6e-118 bit_score=431.8 identity=54.9 coverage=96.40287769784173)
|
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AMDSBA4_17_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2681..4144)
|
glycine dehydrogenase beta subunit (EC:1.4.4.2)
glycine dehydrogenase beta subunit (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 n=1 Tax=Methylococcus capsulatus str. Bath RepID=GCSPB_METCA (db=UNIREF evalue=5.8e-147 bit_score=526.6 identity=56.1 coverage=98.15573770491804)
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AMDSBA4_17_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4129..5463)
|
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=2 Tax=Caldanaerobacter subterraneus RepID=GCSPA_THETN (db=UNIREF evalue=7.9e-111 bit_score=406.4 identity=50.5 coverage=96.40449438202248)
GLYCINE DEHYDROGENASE (db=HMMPanther db_id=PTHR11773 from=1 to=432 evalue=1.1e-159 interpro_id=IPR020581 interpro_description=Glycine cleavage system P protein GO=Molecular Function: glycine dehydrogenase (decarboxylating) activity (GO:0004375), Biological Process: oxidation-reduction process (GO:0055114))
|
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AMDSBA4_17_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5466..5834)
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gcvH; glycine cleavage system H protein
Probable glycine cleavage system H protein n=2 Tax=Staphylothermus RepID=A3DNJ5_STAMF (db=UNIREF evalue=1.6e-21 bit_score=107.8 identity=44.1 coverage=91.05691056910568)
LIPOYL (db=PatternScan db_id=PS00189 from=44 to=73 evalue=0.0 interpro_id=IPR003016 interpro_description=2-oxo acid dehydrogenase, lipoyl-binding site)
gcvH: glycine cleavage system H protein (db=HMMTigr db_id=TIGR00527 from=2 to=122 evalue=2.1e-49 interpro_id=IPR017453 interpro_description=Glycine cleavage H-protein, subgroup GO=Biological Process: glycine decarboxylation via glycine cleavage system (GO:0019464))
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AMDSBA4_17_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5907..7124)
|
gcvT; glycine cleavage system T protein
Aminomethyltransferase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=GCST_MOOTA (db=UNIREF evalue=2.0e-92 bit_score=345.1 identity=51.1 coverage=88.17733990147784)
seg (db=Seg db_id=seg from=342 to=358)
|
|
AMDSBA4_17_9
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
|
Not on your lists |
7535..9010
|
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYK4_ACIFD (db=UNIREF evalue=3.4e-171 bit_score=607.1 identity=59.7 coverage=97.35772357723577)
cytosine/purines uracil thiamine allantoin permease
rbh
cytosine/purines uracil thiamine allantoin permease
rbh
|
|
AMDSBA4_17_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9059..10096
|
adenine deaminase
adenine deaminase
Adenine deaminase n=1 Tax=Geobacter lovleyi SZ RepID=ADE_GEOLS (db=UNIREF evalue=1.1e-99 bit_score=369.0 identity=54.3 coverage=96.53179190751445)
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|
AMDSBA4_17_11
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10165..11481
|
Guanine deaminase (EC:3.5.4.3)
rbh
Guanine deaminase (EC:3.5.4.3)
rbh
Guanine deaminase n=1 Tax=Citreicella sp. SE45 RepID=D0D837_9RHOB (db=UNIREF evalue=1.7e-105 bit_score=388.7 identity=47.9 coverage=95.67198177676538)
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AMDSBA4_17_12
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11524..12780
|
ammonium transporter
ammonium transporter
Putative ammonium transporter family n=3 Tax=environmental samples RepID=B3T383_9ARCH (db=UNIREF evalue=6.2e-65 bit_score=253.8 identity=37.0 coverage=96.18138424821002)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
|
|
AMDSBA4_17_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13136..13750)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
seg (db=Seg db_id=seg from=163 to=174)
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AMDSBA4_17_14
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria
|
Not on your lists |
comp(13756..14097)
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PadR-like family transcriptional regulator
Transcriptional regulator PadR-like family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1E3_9FLAO (db=UNIREF evalue=6.7e-14 bit_score=82.4 identity=39.8 coverage=85.08771929824562)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=12 to=111 evalue=1.2e-25)
|
|
AMDSBA4_17_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14295..15209
|
inosine-uridine preferring nucleoside hydrolase-domain-containing protein
Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y4F1_CLAL4 (db=UNIREF evalue=4.1e-26 bit_score=124.4 identity=31.8 coverage=87.21311475409837)
Nucleoside hydrolase (db=superfamily db_id=SSF53590 from=3 to=302 evalue=9.6e-72 interpro_id=IPR001910 interpro_description=Inosine/uridine-preferring nucleoside hydrolase domain)
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AMDSBA4_17_16
unknown
|
Not on your lists |
comp(15210..15776)
|
seg (db=Seg db_id=seg from=175 to=184)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=32 to=187 evalue=6.7e-17 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=131 to=185 evalue=1.4e-07 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct
(db=HMMPfam db_id=PF08281 from=140 to=183 evalue=6.2e-06 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
|
|
AMDSBA4_17_17
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16399..17865)
|
Putative Tetratricopeptide TPR_4 n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUZ6_9BRAD (db=UNIREF evalue=2.2e-98 bit_score=365.2 identity=41.4 coverage=96.11451942740287)
pyridoxal-dependent decarboxylase
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=16 to=153 evalue=3.2e-26 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
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AMDSBA4_17_18
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17874..18614)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFL2_9FIRM (db=UNIREF evalue=7.6e-47 bit_score=193.0 identity=40.0 coverage=99.19028340080972)
Putative uncharacterized protein {ECO:0000313|EMBL:AEF94661.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carb
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AMDSBA4_17_19
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18865..19812)
|
nucleoside-diphosphate-sugar epimerase
UDP-xylose synthase n=1 Tax=Rhodotorula glutinis ATCC 204091 RepID=G0SY13_RHOG2 (db=UNIREF evalue=1.1e-71 bit_score=275.8 identity=47.6 coverage=97.46835443037975)
DTDP-GLUCOSE 4-6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF35 from=6 to=313 evalue=5.4e-128)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=6 to=313 evalue=5.4e-128)
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AMDSBA4_17_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
|
Not on your lists |
comp(19828..21204)
|
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=2 Tax=Halobacterium salinarum RepID=B0R8F6_HALS3 (db=UNIREF evalue=4.4e-72 bit_score=277.7 identity=37.5 coverage=93.02832244008714)
NDP-sugDHase: nucleotide sugar dehydroge (db=HMMTigr db_id=TIGR03026 from=1 to=439 evalue=1.0e-154 interpro_id=IPR017476 interpro_description=Nucleotide sugar dehydrogenase GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA4_17_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21201..22331)
|
group 1 glycosyl transferase
rbh
Galactosyltransferase or lps biosynthesis rfbu related protein n=1 Tax=Moritella sp. PE36 RepID=A6F695_9GAMM (db=UNIREF evalue=1.1e-23 bit_score=116.7 identity=25.6 coverage=97.34748010610079)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=28 to=373 evalue=5.5e-61)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=44 to=376 evalue=4.1e-46)
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|
AMDSBA4_17_22
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
22441..22998
|
seg (db=Seg db_id=seg from=73 to=88)
|
|
AMDSBA4_17_23
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23018..23914)
|
hypothetical protein
Putative phage integrase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NCM2_9ACTO (db=UNIREF evalue=4.9e-16 bit_score=90.9 identity=27.4 coverage=88.96321070234113)
Uncharacterized protein {ECO:0000313|EMBL:EET88769.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Putative uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPN9_9CLOT
|
|
AMDSBA4_17_24
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(23904..24980)
|
membrane protein of unknown function
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii DSM 519 RepID=E3PVF2_CLOSD (db=UNIREF evalue=1.0e-36 bit_score=159.8 identity=31.5 coverage=91.92200557103064)
transmembrane_regions (db=TMHMM db_id=tmhmm from=340 to=357)
seg (db=Seg db_id=seg from=116 to=131)
|
|
AMDSBA4_17_25
unknown
|
Not on your lists |
25209..25457
|
seg (db=Seg db_id=seg from=27 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
|
|
AMDSBA4_17_26
unknown
|
Not on your lists |
comp(25927..26184)
|
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=7 to=57 evalue=1.5e-05 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
|
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AMDSBA4_17_27
unknown
|
Not on your lists |
27169..27396
|
27169..27396 + ( gc_cont=0.491)
|
|
AMDSBA4_17_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27473..27676
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U121_9FIRM (db=UNIREF evalue=3.3e-08 bit_score=62.8 identity=52.3 coverage=92.64705882352942)
BAS1536-like (db=superfamily db_id=SSF140500 from=10 to=66 evalue=8.7e-06)
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AMDSBA4_17_29
unknown
|
Not on your lists |
comp(27680..27880)
|
||
AMDSBA4_17_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28023..28409
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U122_9FIRM (db=UNIREF evalue=2.8e-16 bit_score=90.5 identity=44.7 coverage=79.06976744186046)
(db=HMMPfam db_id=PF03885 from=33 to=127 evalue=2.8e-09 interpro_id=IPR005585 interpro_description=Protein of unknown function DUF327)
Uncharacterized protein {ECO:0000313|EMBL:AEW06567.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
|