| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
|
AMDSBA5_59_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(106..966)
|
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWG5_9FIRM (db=UNIREF evalue=5.3e-92 bit_score=343.2 identity=62.4 coverage=96.51567944250871)
seg (db=Seg db_id=seg from=84 to=96)
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
|
|
|
AMDSBA5_59_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(997..1746)
|
enoyl-ACP reductase (EC:1.3.1.9)
Hydroxybutyrate dehydrogenase n=1 Tax=Danaus plexippus RepID=G6D6V2_DANPL (db=UNIREF evalue=5.8e-10 bit_score=70.5 identity=24.7 coverage=96.39999999999999)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=243 evalue=3.8e-87)
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (db=HMMPanther db_id=PTHR19410:SF12 from=1 to=243 evalue=3.8e-87)
|
|
|
AMDSBA5_59_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1868..2848)
|
glyoxylate reductase
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NUU0_9GAMM (db=UNIREF evalue=1.9e-29 bit_score=135.6 identity=34.5 coverage=81.9571865443425)
seg (db=Seg db_id=seg from=248 to=259)
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=225 to=241 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037), Biological Process: oxidation-reduction process (GO:0055114))
|
|
|
AMDSBA5_59_4
unknown
|
Not on your lists |
comp(3011..3202)
|
3011..3202 - ( gc_cont=0.500)
|
|
|
AMDSBA5_59_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(4478..5506)
|
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWE5_9FIRM (db=UNIREF evalue=5.4e-91 bit_score=340.1 identity=44.6 coverage=98.25072886297376)
|
|
|
AMDSBA5_59_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5635..6612)
|
electron transfer flavoprotein alpha subunit apoprotein
electron transfer flavoprotein alpha subunit apoprotein
Electron transfer flavoprotein alpha subunit apoprotein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWE4_9FIRM (db=UNIREF evalue=6.2e-113 bit_score=412.9 identity=63.8 coverage=99.38650306748467)
|
|
|
AMDSBA5_59_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(6627..7394)
|
electron transfer flavoprotein subunit beta
Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B5YMT1_THAPS (db=UNIREF evalue=1.4e-38 bit_score=165.6 identity=39.1 coverage=95.703125)
Electron transfer flavoprotein, beta subunit (db=HMMPIR db_id=PIRSF000090 from=1 to=254 evalue=1.9e-105 interpro_id=IPR012255 interpro_description=Electron transfer flavoprotein, beta subunit GO=Molecular Function: electron carrier activity (GO:0009055))
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=1 to=244 evalue=3.7e-92)
|
|
|
AMDSBA5_59_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7438..8883)
|
selA; selenocysteine synthase
rbh
selA; selenocysteine synthase
rbh
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GC99_9FIRM (db=UNIREF evalue=2.3e-100 bit_score=371.7 identity=45.1 coverage=92.32365145228216)
seg (db=Seg db_id=seg from=160 to=179)
|
|
|
AMDSBA5_59_9
unknown
|
Not on your lists |
comp(8883..9086)
|
8883..9086 - ( gc_cont=0.426)
|
|
|
AMDSBA5_59_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9167..10141)
|
hemB; delta-aminolevulinic acid dehydratase
rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=HEM2_ARCFU (db=UNIREF evalue=1.1e-90 bit_score=339.0 identity=52.0 coverage=97.84615384615385)
D_ALA_DEHYDRATASE (db=PatternScan db_id=PS00169 from=240 to=252 evalue=0.0 interpro_id=IPR001731 interpro_description=Porphobilinogen synthase GO=Molecular Function: porphobilinogen synthase activity (GO:0004655), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: metal ion binding (GO:0046872))
|
|
|
AMDSBA5_59_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10149..11483)
|
uroporphyrinogen III synthase HEM4
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RV01_9FIRM (db=UNIREF evalue=2.7e-18 bit_score=99.0 identity=28.3 coverage=55.28089887640449)
HemD-like (db=superfamily db_id=SSF69618 from=194 to=441 evalue=3.3e-51 interpro_id=IPR003754 interpro_description=Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO=Molecular Function: uroporphyrinogen-III synthase activity (GO:0004852), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
(db=HMMPfam db_id=PF02602 from=210 to=434 evalue=6.6e-51 interpro_id=IPR003754 interpro_description=Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO=Molecular Function: uroporphyrinogen-III synthase activity (GO:0004852), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
|
|
|
AMDSBA5_59_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(11499..12464)
|
hemC; porphobilinogen deaminase
Porphobilinogen deaminase n=2 Tax=Methanotorris RepID=H1KWN0_9EURY (db=UNIREF evalue=1.5e-39 bit_score=169.1 identity=38.9 coverage=77.95031055900621)
seg (db=Seg db_id=seg from=33 to=41)
Porphobilinogen deaminase (db=HMMPIR db_id=PIRSF001438 from=23 to=321 evalue=5.9e-130 interpro_id=IPR000860 interpro_description=Tetrapyrrole biosynthesis, hydroxymethylbilane synthase GO=Molecular Function: hydroxymethylbilane synthase activity (GO:0004418), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
|
|
|
AMDSBA5_59_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12439..13245)
|
cytochrome c assembly protein
Cytochrome c assembly protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWD7_9FIRM (db=UNIREF evalue=5.0e-60 bit_score=236.9 identity=45.1 coverage=98.51301115241635)
seg (db=Seg db_id=seg from=246 to=268)
seg (db=Seg db_id=seg from=149 to=161)
|
|
|
AMDSBA5_59_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13260..14570)
|
hemA; shikimate/quinate 5-dehydrogenase
Glutamyl-tRNA reductase 2 n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=HEM12_KORVE (db=UNIREF evalue=2.1e-63 bit_score=248.8 identity=34.4 coverage=94.05034324942791)
seg (db=Seg db_id=seg from=313 to=327)
GLUTR (db=PatternScan db_id=PS00747 from=96 to=119 evalue=0.0 interpro_id=IPR018214 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: oxidation-reduction process (GO:0055114))
|
|
|
AMDSBA5_59_15
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(14891..15100)
|
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=4.8e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=11 to=49 evalue=1.4e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=10 to=64 evalue=8.6e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV58102.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus
|
|
|
AMDSBA5_59_16
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
15260..15622
|
XRE family transcriptional regulator
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=116 evalue=1.1e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=6 to=62 evalue=3.2e-14 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=68 evalue=3.7e-14 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
|
|
|
AMDSBA5_59_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15660..16529)
|
sucD; succinyl-CoA synthetase subunit alpha
Malate--CoA ligase subunit alpha n=8 Tax=Alphaproteobacteria RepID=MTKB_METEA (db=UNIREF evalue=5.4e-68 bit_score=263.5 identity=46.6 coverage=99.3103448275862)
seg (db=Seg db_id=seg from=209 to=221)
SUCCINYL_COA_LIG_2 (db=PatternScan db_id=PS00399 from=236 to=249 evalue=0.0 interpro_id=IPR017440 interpro_description=ATP-citrate lyase/succinyl-CoA ligase, active site GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP citrate synthase activity (GO:0003878), Molecular Function: succinate-CoA ligase (ADP-forming) activity (GO:0004775), Biological Process: metabolic process (GO:0008152))
|
|
|
AMDSBA5_59_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16530..17642)
|
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA synthetase (ADP-forming) beta subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLF8_MOOTA (db=UNIREF evalue=8.8e-47 bit_score=193.4 identity=32.6 coverage=92.99191374663073)
coiled-coil (db=Coil db_id=coil from=349 to=370 evalue=NA)
seg (db=Seg db_id=seg from=244 to=255)
|
|
|
AMDSBA5_59_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17639..18913)
|
malate dehydrogenase (EC:1.1.1.40)
malate dehydrogenase (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating)(NADP+) n=2 Tax=Haloferax RepID=I3R7B9_HALME (db=UNIREF evalue=1.4e-101 bit_score=375.6 identity=47.5 coverage=97.41176470588235)
seg (db=Seg db_id=seg from=371 to=383)
|
|
|
AMDSBA5_59_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18933..19865)
|
mdh; malate dehydrogenase
mdh; malate dehydrogenase
Malate dehydrogenase n=3 Tax=Bacteria RepID=C4W9S7_STAWA (db=UNIREF evalue=2.2e-83 bit_score=314.7 identity=50.6 coverage=99.03536977491962)
|
|
|
AMDSBA5_59_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19889..21106)
|
icd; isocitrate dehydrogenase
Isocitrate dehydrogenase [NADP] n=6 Tax=Cyanobacteria RepID=IDH_NOSS1 (db=UNIREF evalue=1.9e-74 bit_score=285.4 identity=55.3 coverage=60.09852216748769)
IDH_IMDH (db=PatternScan db_id=PS00470 from=291 to=310 evalue=0.0 interpro_id=IPR019818 interpro_description=Isocitrate/isopropylmalate dehydrogenase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
prok_nadp_idh: isocitrate dehydrogenase (db=HMMTigr db_id=TIGR00183 from=3 to=405 evalue=4.5e-192 interpro_id=IPR004439 interpro_description=Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO=Molecular Function: isocitrate dehydrogenase (NADP+) activity (GO:0004450), Biological Process: tricarboxylic acid cycle (GO:0006099), Biological Process: oxidation-reduction process (GO:0055114))
|
|
|
AMDSBA5_59_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21478..23277)
|
small GTP-binding protein
small GTP-binding protein
Small GTP-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVY3_9FIRM (db=UNIREF evalue=7.0e-195 bit_score=686.0 identity=58.5 coverage=99.16666666666667)
seg (db=Seg db_id=seg from=440 to=457)
|
|
|
AMDSBA5_59_23
unknown
|
Not on your lists |
23380..23721
|
23380..23721 + ( gc_cont=0.491)
|
|
|
AMDSBA5_59_24
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria
|
Not on your lists |
23787..25079
|
MFS transporter
Major facilitator superfamily MFS_1 n=6 Tax=Thermoanaerobacter RepID=E1FCS7_9THEO (db=UNIREF evalue=2.1e-36 bit_score=159.1 identity=26.5 coverage=88.39907192575406)
seg (db=Seg db_id=seg from=302 to=315)
transmembrane_regions (db=TMHMM db_id=tmhmm from=400 to=422)
|
|
|
AMDSBA5_59_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25114..27105)
|
hypothetical protein
hypothetical protein
Iron-sulfur binding reductase n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O28501_ARCFU (db=UNIREF evalue=2.3e-58 bit_score=232.6 identity=36.8 coverage=50.602409638554214)
seg (db=Seg db_id=seg from=6 to=17)
|
|
|
AMDSBA5_59_26
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27182..27415)
|
(db=HMMPfam db_id=PF04023 from=1 to=70 evalue=6.8e-10 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
no description (db=HMMSmart db_id=SM00899 from=1 to=71 evalue=2.9e-09 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
C-terminal domain of transcriptional repressors (db=superfamily db_id=SSF50037 from=27 to=71 evalue=8.1e-07 interpro_id=IPR008988 interpro_description=Transcriptional repressor, C-terminal)
FeoA family protein n=1 Tax=Caloramator australicus RC3 RepID=I7LKQ1_9CLOT
|
|
|
AMDSBA5_59_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27412..28170)
|
Sec-independent protein translocase TatC
Sec-independent protein translocase protein TatC 3 n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DTP2_9BACL (db=UNIREF evalue=2.5e-37 bit_score=161.4 identity=33.2 coverage=91.30434782608695)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
|
|
|
AMDSBA5_59_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(28201..28848)
|
Response regulator, NarL-family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV68_9GAMM (db=UNIREF evalue=6.3e-21 bit_score=106.7 identity=31.6 coverage=95.37037037037037)
seg (db=Seg db_id=seg from=31 to=43)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=166 to=193 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
CheY-like (db=superfamily db_id=SSF52172 from=2 to=186 evalue=9.6e-36 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
|
|
|
AMDSBA5_59_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(28814..29725)
|
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SB28_9BACL (db=UNIREF evalue=5.4e-26 bit_score=124.0 identity=27.6 coverage=87.82894736842105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=286 to=301)
|
|
|
AMDSBA5_59_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29852..30646)
|
alpha/beta hydrolase fold protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=2 to=256 evalue=1.7e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=14 to=256 evalue=4.1e-36)
HYDROLASE (db=HMMPanther db_id=PTHR10992:SF16 from=14 to=257 evalue=1.2e-25)
|
