ggKbase home page

AMDSBA2_131

Alias: SULFO_6_131

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_131_1
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3..500)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:EQB72418.1}; Flags: Fragment;; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental sa
3..500 - ( gc_cont=0.426)
AMDSBA2_131_2
unknown

Not on your lists

comp(538..639)
-----------------
DNA (102bp)
protein (34aa)
ADXRDTASE (db=FPrintScan db_id=PR00419 from=25 to=33 evalue=1.1e-06)
ADXRDTASE (db=FPrintScan db_id=PR00419 from=2 to=24 evalue=1.1e-06)
(db=HMMPfam db_id=PF00890 from=2 to=31 evalue=1.2e-08 interpro_id=IPR003953 interpro_description=Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=32 evalue=1.9e-13)
AMDSBA2_131_3
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

835..1611
-----------------
DNA (777bp)
protein (259aa)
Signal protein n=1 Tax=Oceanimonas sp. GK1 RepID=H2FUN0_OCESG (db=UNIREF evalue=2.3e-13 bit_score=82.0 identity=29.8 coverage=88.41698841698842)
(db=HMMPfam db_id=PF00563 from=22 to=245 evalue=2.7e-30 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
EAL domain-like (db=superfamily db_id=SSF141868 from=14 to=245 evalue=2.1e-27 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
no description (db=HMMSmart db_id=SM00052 from=5 to=252 evalue=4.6e-09 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
AMDSBA2_131_4
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1612..4014
-----------------
DNA (2403bp)
protein (801aa)
General substrate transporter {ECO:0000313|EMBL:EJY54711.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperi
General substrate transporter n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E139_9BACL (db=UNIREF evalue=1.5e-119 bit_score=436.4 identity=47.8 coverage=55.305867665418226)
major facilitator superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=325 to=342)
AMDSBA2_131_5
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

4284..6077
-----------------
DNA (1794bp)
protein (598aa)
SMP-30/Gluconolaconase/LRE-like region
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:CCW36332.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="C
Peptidoglycan-binding domain 1 protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I2V2_SULAT (db=UNIREF evalue=9.2e-50 bit_score=204.1 identity=37.2 coverage=51.17056856187291)
seg (db=Seg db_id=seg from=585 to=594)
AMDSBA2_131_6
unknown

Not on your lists

6263..6394
-----------------
DNA (132bp)
protein (44aa)
6263..6394 + ( gc_cont=0.515)
AMDSBA2_131_7
unknown

Not on your lists

comp(6543..7205)
-----------------
DNA (663bp)
protein (221aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=127 to=149)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
AMDSBA2_131_8
unknown

Not on your lists

comp(7172..7501)
-----------------
DNA (330bp)
protein (110aa)
7172..7501 - ( gc_cont=0.473)
AMDSBA2_131_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7642..7959)
-----------------
DNA (318bp)
protein (106aa)
putative nucleotidyltransferase Tax=GWA2_Rokubacteria_70_23_curated
nucleotidyltransferase
Putative nucleotidyltransferase n=1 Tax=Moorea producens 3L RepID=F4XRW5_9CYAN (db=UNIREF evalue=8.8e-12 bit_score=75.5 identity=37.5 coverage=87.73584905660378)
(db=HMMPfam db_id=PF01909 from=13 to=91 evalue=2.0e-09 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
Displaying 9 items

View Taxonomy