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13_1_20cm_4_scaffold_461

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_461_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_461_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

250..750
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000367ACEC
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_461_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

800..1423
DNA (624bp) protein (208aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_461_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1397..1816)
DNA (420bp) protein (140aa)
Putative CoA-binding protein n=1 Tax=Thauera sp. 27 RepID=N6XH24_9RHOO
hypothetical protein; K06929 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative CoA-binding protein
13_1_20cm_4_scaffold_461_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1848..2333)
DNA (486bp) protein (162aa)
Nudix hydrolase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYH3_9RHOB
7,8-dihydro-8-oxoguanine-triphosphatase/thiamin-phosphate pyrophosphorylase-like protein Tax=RBG_16_Euryarchaeota_68_13_curated
mutator MutT protein
13_1_20cm_4_scaffold_461_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2360..3811
DNA (1452bp) protein (484aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNC5_ACIS0 rbh
single-stranded DNA-specific exonuclease Tax=RBG_16_Euryarchaeota_67_27_curated
single-stranded DNA-specific exonuclease
13_1_20cm_4_scaffold_461_7
Crenarchaeota, Archaea

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comp(3856..4380)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037A42DD
13_1_20cm_4_scaffold_461_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4528..4797
DNA (270bp) protein (90aa)
50S ribosomal protein L7Ae n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCL4_9EURY
rpl7ae; 50S ribosomal protein L7Ae Tax=RBG_16_Euryarchaeota_68_12_curated
rpl7ae; 50S ribosomal protein L7Ae
13_1_20cm_4_scaffold_461_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


4827..5039
DNA (213bp) protein (71aa)
30S ribosomal protein S28 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CA907
rps28e; 30S ribosomal protein S28e Tax=RBG_16_Euryarchaeota_68_13_curated
SSU ribosomal protein S28e
13_1_20cm_4_scaffold_461_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5044..5658
DNA (615bp) protein (205aa)
50S ribosomal protein L24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T689_9EURY
50S ribosomal protein L24e Tax=RBG_16_Euryarchaeota_68_13_curated
ribosomal protein L24E
13_1_20cm_4_scaffold_461_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5655..6113
DNA (459bp) protein (153aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Euryarchaeota_67_27_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY9_ARCPA
13_1_20cm_4_scaffold_461_12
unknown

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comp(6190..6570)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_4_scaffold_461_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6729..8288
DNA (1560bp) protein (520aa)
Probable translation initiation factor IF-2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T9H2_ACIB4
translation initiation factor aIF-2; K03243 translation initiation factor 5B Tax=RBG_16_Euryarchaeota_68_13_curated
translation initiation factor aIF-2
13_1_20cm_4_scaffold_461_14
unknown

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8349..8696
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_4_scaffold_461_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8894..9787
DNA (894bp) protein (298aa)
GCN5-related N-acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0A7_DYAFD
N-acetyltransferase GCN5 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_461_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9814..10137
DNA (324bp) protein (108aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_461_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10140..11477)
DNA (1338bp) protein (446aa)
Membrane metalloprotease n=1 Tax=mine drainage metagenome RepID=T1AYU3_9ZZZZ rbh
putative membrane-associated Zn-dependent protease Tax=RBG_16_Euryarchaeota_68_13_curated
putative membrane-associated Zn-dependent protease
13_1_20cm_4_scaffold_461_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11514..11948)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D55A8
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_461_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11990..12322
DNA (333bp) protein (111aa)
Divalent cation tolerance protein, conjectural n=1 Tax=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) RepID=Q8ZVE5_PYRAE
divalent-cation tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
divalent cation tolerance protein
13_1_20cm_4_scaffold_461_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12313..13176)
DNA (864bp) protein (288aa)
MEMO1 family protein AciM339_1253 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM58_ACIS0
putative dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
putative dioxygenase
13_1_20cm_4_scaffold_461_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(13189..13809)
DNA (621bp) protein (207aa)
30S ribosomal protein S2 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F358
rps2P; 30S ribosomal protein S2 Tax=RBG_16_Euryarchaeota_67_27_curated
rps2P; 30S ribosomal protein S2
13_1_20cm_4_scaffold_461_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13809..15020)
DNA (1212bp) protein (404aa)
Enolase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK45_ACIS0 rbh
enolase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
enolase
13_1_20cm_4_scaffold_461_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15250..15648)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S023_THEPD
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_461_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15802..16206)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2Q2_9ARCH
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_461_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16344..16490
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0A1_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_461_26
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

16578..17903
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Euryarchaeota_68_13_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003755AF3 rbh
13_1_20cm_4_scaffold_461_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

17991..18860
DNA (870bp) protein (290aa)
Extracellular solute-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SMH0_9BACT
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ABC-type transporter, periplasmic subunit family 3
13_1_20cm_4_scaffold_461_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18935..19621
DNA (687bp) protein (229aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5CD02_MICLC
glutamine ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
amino acid ABC transporter permease
13_1_20cm_4_scaffold_461_29
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

19710..20456
DNA (747bp) protein (249aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RBG_16_Euryarchaeota_68_13_curated
ABC transporter n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B75830
ABC transporter-like protein
13_1_20cm_4_scaffold_461_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

20460..21353
DNA (894bp) protein (298aa)
Amino acid ABC transporter membrane protein, PAAT family n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DCC0_DESAJ
putative glutamine ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
amino acid ABC transporter membrane protein, PAAT family
Displaying items 1-30 of 34 in total

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