ggKbase home page

RifSed_csp2_16ft_2_scaffold_10894

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_10894_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(3..287)
DNA (285bp) protein (95aa)
CCA-adding enzyme n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK52_ACIS0
CCA-adding enzyme
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_10894_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(327..809)
DNA (483bp) protein (161aa)
Membrane protein, MarC family member n=1 Tax=uncultured archaeon RepID=D1JFE0_9ARCH
membrane protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_10894_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(834..974)
DNA (141bp) protein (47aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_10894_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1009..1233)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003724CB2
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_10894_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1412..2629
DNA (1218bp) protein (406aa)
Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IBV4_CHLRE
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_10894_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2689..3150
DNA (462bp) protein (154aa)
short-chain dehydrogenase/reductase SDR id=14425470 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR
Tax=CSP1_2_Dadabacteria
RifSed_csp2_16ft_2_scaffold_10894_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3252..4502)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAA7_METCZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_10894_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4783..4932)
DNA (150bp) protein (50aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_10894_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4972..6276)
DNA (1305bp) protein (435aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
hypothetical protein id=8267124 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_10894_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6321..6971)
DNA (651bp) protein (217aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YUS1_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_10894_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7079..7633
DNA (555bp) protein (185aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_10894_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7724..8287
DNA (564bp) protein (188aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp2_16ft_2_scaffold_10894_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

8485..11148
DNA (2664bp) protein (888aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_10894_14
unknown

Not on your lists

comp(11200..11337)
DNA (138bp) protein (46aa)

This feature has no annotations

RifSed_csp2_16ft_2_scaffold_10894_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11338..11958)
DNA (621bp) protein (207aa)
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W361_UNCMA
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_10894_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11959..12069)
DNA (111bp) protein (37aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 16 items

View Taxonomy