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RifSed_csp2_16ft_2_scaffold_12910

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_12910_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..1012)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI000373D560
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1009..2436)
DNA (1428bp) protein (476aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2433..3557)
DNA (1125bp) protein (375aa)
DOMON domain-containing protein id=14632731 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
DOMON domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3554..4879)
DNA (1326bp) protein (442aa)
Polysulfide reductase id=4827478 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysulfide reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4884..5684)
DNA (801bp) protein (267aa)
Fe-S-cluster-containing hydrogenase subunit id=24489987 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Fe-S-cluster-containing hydrogenase subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5808..6164
DNA (357bp) protein (119aa)
Transcriptional repressor, CopY family n=1 Tax=mine drainage metagenome RepID=T1AHX0_9ZZZZ
CopY family transcriptional repressor
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp2_16ft_2_scaffold_12910_7

Not on your lists

6161..7066
DNA (906bp) protein (302aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZY46_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD53141.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
antirepressor regulating drug resistance protein
RifSed_csp2_16ft_2_scaffold_12910_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7124..7741
DNA (618bp) protein (206aa)
Uncharacterized protein id=15191656 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_9
unknown

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7752..8012
DNA (261bp) protein (87aa)

This feature has no annotations

RifSed_csp2_16ft_2_scaffold_12910_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7987..9006
DNA (1020bp) protein (340aa)
Putative uncharacterized protein id=1895455 bin=GWB2_Chloroflexi_54_36 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
cytochrome c biogenesis transmembrane protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp2_16ft_2_scaffold_12910_11
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9019..11133)
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034B9BF6
acyl-CoA synthetase/AMP-acid ligase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
RifSed_csp2_16ft_2_scaffold_12910_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11206..11697)
DNA (492bp) protein (164aa)
Rossmann fold nucleotide-binding protein-like protein; K06966 id=1242531 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_12910_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11748..12476)
DNA (729bp) protein (243aa)
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1A0W9_9ZZZZ
methyltransferase type 11
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_12910_14
unknown

Not on your lists

comp(12448..12648)
DNA (201bp) protein (67aa)

This feature has no annotations

RifSed_csp2_16ft_2_scaffold_12910_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12893..15160
DNA (2268bp) protein (756aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B5425
cat3; cationic amino acid transporter
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_12910_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15288..15833
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003791710
NTPase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp2_16ft_2_scaffold_12910_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

15871..16971
DNA (1101bp) protein (367aa)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKW5_THELI
tRNA (guanine-N2)-dimethyltransferase
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_12910_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(16956..17654)
DNA (699bp) protein (233aa)
Hef nuclease n=1 Tax=Thermococcus sp. CL1 RepID=I3ZVS9_9EURY
DEAD/DEAH box helicase
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_2_scaffold_12910_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17737..18795
DNA (1059bp) protein (353aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5U2_9BACI
multidrug-efflux transporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 19 items

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