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RifSed_csp1_13ft_4_scaffold_6322

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_6322_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3..347)
DNA (345bp) protein (115aa)
Proline dehydrogenase Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFF7_9EURY
Proline dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_6322_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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417..1136
DNA (720bp) protein (240aa)
high-affinity nickel-transporter bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative High-affinity nickel/cobalt-transporter
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_6322_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1155..1655
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWY4_METCG
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_6322_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1745..2440
DNA (696bp) protein (232aa)
hypothetical protein Tax=unclassified Crenarchaeota RepID=UPI00037EF1C0
tonoplast intrinsic protein (Aquaporin)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_6322_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2546..3337
DNA (792bp) protein (264aa)
Oxidoreductase FAD/NAD(P)-binding protein bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
oxidoreductase FAD/NAD(P)-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_6322_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3347..3862)
DNA (516bp) protein (172aa)
Nitrite reductase (NO-forming) Tax=Afipia sp. 1NLS2 RepID=D6V265_9BRAD
Copper-containing nitrite reductase {ECO:0000313|EMBL:CEG07500.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
RifSed_csp1_13ft_4_scaffold_6322_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3969..4496
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ08_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43245.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
RifSed_csp1_13ft_4_scaffold_6322_8
unknown

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4509..4691
DNA (183bp) protein (61aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_6322_9

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4778..5278
DNA (501bp) protein (167aa)
Ni-containing superoxide dismutase, putative Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CC21_ACAM1
Uncharacterized protein {ECO:0000313|EMBL:KKW13119.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
nickel-containing superoxide dismutase (NISOD)
RifSed_csp1_13ft_4_scaffold_6322_10
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

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5281..5694
DNA (414bp) protein (138aa)
Signal peptidase I Tax=uncultured bacterium RepID=K2CD32_9BACT
signal peptidase I
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
RifSed_csp1_13ft_4_scaffold_6322_11
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

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5777..6253
DNA (477bp) protein (159aa)
Ferritin Dps family protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYI8_9ARCH
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
RifSed_csp1_13ft_4_scaffold_6322_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6303..6962
DNA (660bp) protein (220aa)
thermostable 8-oxoguanine DNA glycosylase bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 12 items

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