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RifSed_csp1_13ft_4_scaffold_3402

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_3402_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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224..1423
DNA (1200bp) protein (400aa)
fosmidmycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Amycolatopsis nigrescens genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
major facilitator transporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3402_2

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comp(1414..1863)
DNA (450bp) protein (150aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1J968_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38648.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp1_13ft_4_scaffold_3402_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1868..2296)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WMW9_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_4_scaffold_3402_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2303..3346)
DNA (1044bp) protein (348aa)
tyrS; tyrosine--tRNA ligase (EC:6.1.1.1)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000365C4D0
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3402_5
unknown

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comp(3387..3587)
DNA (201bp) protein (67aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_3402_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3701..4534
DNA (834bp) protein (278aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_3402_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4653..4862
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_3402_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(4856..6250)
DNA (1395bp) protein (465aa)
prolyl-tRNA ligase (EC:6.1.1.15)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794982
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3402_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6308..8428)
DNA (2121bp) protein (707aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFH5_MYXSD
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_4_scaffold_3402_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

8575..9477
DNA (903bp) protein (301aa)
glutamate formiminotransferase (EC:2.1.2.5)
Uncharacterized protein Tax=uncultured Latescibacteria bacterium RepID=Q2Z0C9_9BACT
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_4_scaffold_3402_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9468..9797
DNA (330bp) protein (110aa)
Formiminotetrahydrofolate cyclodeaminase Tax=Caloramator australicus RC3 RepID=I7K8G0_9CLOT
formiminotransferase-cyclodeaminase
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 11 items

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