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RifSed_csp1_13ft_4_scaffold_3495

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_3495_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(64..888)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370EEDD
heme/copper-type cytochrome/quinol oxidase, subunit 3
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3495_2
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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983..2470
DNA (1488bp) protein (496aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Cytochrome c oxidase subunit 2 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMV1_MARHT
cytochrome c oxidase subunit II
RifSed_csp1_13ft_4_scaffold_3495_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2553..4262
DNA (1710bp) protein (570aa)
fumarate reductase flavoprotein subunit bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdA; fumarate reductase flavoprotein subunit frdA
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3495_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4262..5008
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5061..5441
DNA (381bp) protein (127aa)
Fumarate reductase subunit C Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKS5_AMYSD
Fumarate reductase subunit C
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5441..5812
DNA (372bp) protein (124aa)
Fumarate reductase D subunit Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LAB2_TOLAT
fumarate reductase D subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5813..6046)
DNA (234bp) protein (78aa)
Translation elongation factor-like protein Tax=Dehalococcoides mccartyi RepID=D2BID7_DEHSV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation elongation factor-like protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6230..6445
DNA (216bp) protein (72aa)
Small nuclear ribonucleoprotein Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
Like-Sm ribonucleoprotein core
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6492..7505
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_3495_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7502..8857
DNA (1356bp) protein (452aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB65_ACIB4
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_3495_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8854..9642)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 11 items

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