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RifSed_csp1_13ft_4_scaffold_12225

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_12225_1
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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2..643
DNA (642bp) protein (214aa)
Putative amidohydrolase Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9Y9P8_AERPE
amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAA81252.1}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC; 100138 / K1).;"
RifSed_csp1_13ft_4_scaffold_12225_2
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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740..1507
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9Y9P6_AERPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAA81254.2}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC; 100138 / K1).;"
RifSed_csp1_13ft_4_scaffold_12225_3
unknown

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comp(1571..2134)
DNA (564bp) protein (188aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_12225_4
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2602..2853
DNA (252bp) protein (84aa)
cupin Tax=Methylobacterium sp. 88A RepID=UPI00037E0A9A
cupin
Cupin {ECO:0000313|EMBL:AKE01134.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
RifSed_csp1_13ft_4_scaffold_12225_5
unknown

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3278..4003
DNA (726bp) protein (242aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_12225_6
uncultured ammonia-oxidizing beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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4014..4814
DNA (801bp) protein (267aa)
Ammonia monooxygenase subunit A (Fragment) Tax=uncultured ammonia-oxidizing beta proteobacterium RepID=A3F8L7_9PROT
Ammonia monooxygenase subunit A {ECO:0000313|EMBL:ABN13033.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured ammonia-oxidizing beta proteobacterium.;"
ammonia monooxygenase
RifSed_csp1_13ft_4_scaffold_12225_7
unknown

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4814..5032
DNA (219bp) protein (73aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_12225_8
unknown

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5029..5796
DNA (768bp) protein (256aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_12225_9
unknown

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5793..6062
DNA (270bp) protein (90aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_12225_10
RBG_16_Archaea_50_20_curated, Archaea

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6123..6866
DNA (744bp) protein (248aa)
Isoprenylcysteine carboxyl methyltransferase bin=GWA2_OP3_52_12 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Isoprenylcysteine carboxyl methyltransferase
Tax=RBG_16_Archaea_50_20_curated
RifSed_csp1_13ft_4_scaffold_12225_11
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(6884..7906)
DNA (1023bp) protein (341aa)
adh; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:BAA81251.2}; EC=1.1.1.1 {ECO:0000313|EMBL:BAA81251.2};; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC; 100138 / K1).;"
NAD-dependent alcohol dehydrogenase Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9Y9P9_AERPE
RifSed_csp1_13ft_4_scaffold_12225_12
unknown

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comp(8680..8775)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 12 items

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