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rifcsp10_2_sub10_scaffold_8

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsp10_2_sub10_scaffold_8_1
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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1..339
-----------------
DNA (339bp)
protein (113aa)
Transcription factor E n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A625_NITMS
tfe; Transcription factor E
rifcsp10_2_sub10_scaffold_8_2

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403..546
-----------------
DNA (144bp)
protein (48aa)
hypothetical protein n=1 Tax=Nitrosopumilus RepID=UPI0003638FDC
rifcsp10_2_sub10_scaffold_8_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(548..901)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG2_9ARCH
hypothetical protein
rifcsp10_2_sub10_scaffold_8_4

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comp(1038..1697)
-----------------
DNA (660bp)
protein (220aa)
ribD; 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (EC:1.1.1.302)
Putative RibD C-terminal domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6N3 RepID=B3T9G0_9ARCH
rifcsp10_2_sub10_scaffold_8_5

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comp(1684..2874)
-----------------
DNA (1191bp)
protein (397aa)
Amidohydrolase family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0R8_9ARCH rbh
Amidohydrolase
rifcsp10_2_sub10_scaffold_8_6

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comp(2865..3620)
-----------------
DNA (756bp)
protein (252aa)
gch; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ER45_9ARCH
rifcsp10_2_sub10_scaffold_8_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3622..3984)
-----------------
DNA (363bp)
protein (121aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARH4_9ARCH
6,7-dimethyl-8-ribityllumazine synthase
rifcsp10_2_sub10_scaffold_8_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4038..4712)
-----------------
DNA (675bp)
protein (225aa)
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=environmental samples RepID=B3T7T0_9ARCH
rifcsp10_2_sub10_scaffold_8_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4785..5375)
-----------------
DNA (591bp)
protein (197aa)
Riboflavin synthase subunit alpha n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BAZ1_9ARCH
riboflavin synthase subunit alpha
rifcsp10_2_sub10_scaffold_8_10

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comp(5445..6311)
-----------------
DNA (867bp)
protein (289aa)
citryl-CoA lyase (EC:4.1.3.34)
Citrate lyase, beta subunit n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLJ9_9ARCH
rifcsp10_2_sub10_scaffold_8_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(6319..7398)
-----------------
DNA (1080bp)
protein (360aa)
Zn-dependent oxidoreductase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BH05_9ARCH
Zn-dependent oxidoreductase
rifcsp10_2_sub10_scaffold_8_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(7439..7723)
-----------------
DNA (285bp)
protein (95aa)
Putative DNA-binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARB2_9ARCH
double-stranded DNA-binding domain protein
rifcsp10_2_sub10_scaffold_8_13
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7733..8185)
-----------------
DNA (453bp)
protein (151aa)
ASCG--Ribosomal--protein--S19e
30S ribosomal protein S19e n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A642_NITMS
30S ribosomal protein S19e
rifcsp10_2_sub10_scaffold_8_14

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comp(8217..8519)
-----------------
DNA (303bp)
protein (101aa)
ribonuclease P protein component 4 (EC:3.1.26.5)
Ribonuclease P protein component 4 n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BH15_9ARCH
rifcsp10_2_sub10_scaffold_8_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8661..9329)
-----------------
DNA (669bp)
protein (223aa)
nep; Ribosomal RNA small subunit methyltransferase Nep1 (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase Nep1 n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZA6_9ARCH
rifcsp10_2_sub10_scaffold_8_16
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9335..10456)
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZA7_9ARCH
conserved exported protein of unknown function
rifcsp10_2_sub10_scaffold_8_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(10499..13153)
-----------------
DNA (2655bp)
protein (885aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZA8_9ARCH
ribonucleoside-diphosphate reductase
rifcsp10_2_sub10_scaffold_8_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(13363..15468)
-----------------
DNA (2106bp)
protein (702aa)
Regulatory protein ArsR n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A646_NITMS
regulatory protein ArsR
rifcsp10_2_sub10_scaffold_8_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(15587..15748)
-----------------
DNA (162bp)
protein (54aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EBJ5_9ARCH
hypothetical protein
rifcsp10_2_sub10_scaffold_8_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(15819..16214)
-----------------
DNA (396bp)
protein (132aa)
Nucleic-acid-binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQC4_9ARCH
nucleic-acid-binding protein
rifcsp10_2_sub10_scaffold_8_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16186..17340)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQV3_9ARCH rbh
propanoyl-CoA C-acyltransferase
rifcsp10_2_sub10_scaffold_8_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

17413..17868
-----------------
DNA (456bp)
protein (152aa)
DNA topoisomerase type IA Zn finger domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLL2_9ARCH
DNA topoisomerase type IA Zn finger domain-containing protein
rifcsp10_2_sub10_scaffold_8_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(17865..18674)
-----------------
DNA (810bp)
protein (270aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEV2_9ARCH
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
rifcsp10_2_sub10_scaffold_8_24
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(18708..18884)
-----------------
DNA (177bp)
protein (59aa)
4-oxalocrotonate tautomerase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7Z8_9ARCH
4-oxalocrotonate tautomerase
rifcsp10_2_sub10_scaffold_8_25
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(18919..19695)
-----------------
DNA (777bp)
protein (259aa)
Peptidase, S54 family n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0U4_9ARCH
Peptidase, S54 family
rifcsp10_2_sub10_scaffold_8_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(19758..20015)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037E499C
hypothetical protein
Displaying 26 items

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