ggKbase home page

14_1009_13_30cm_scaffold_2542

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_13_30cm_scaffold_2542_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..1355)
DNA (1353bp) protein (451aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_13_30cm_scaffold_2542_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1441..1692
DNA (252bp) protein (84aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(1762..2733)
DNA (972bp) protein (324aa)
Diphthamide synthase subunit n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P9W1_METMZ
dph2; diphthamide synthase subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(2782..3291)
DNA (510bp) protein (170aa)
50S ribosomal protein L10e n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4H9_9EURY
rpl10e; 50S ribosomal protein L10e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_5
unknown

Not on your lists

3369..3608
DNA (240bp) protein (80aa)

This feature has no annotations

14_1009_13_30cm_scaffold_2542_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3671..4450
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

4398..5522
DNA (1125bp) protein (375aa)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=2 Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_13_30cm_scaffold_2542_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5526..6647
DNA (1122bp) protein (374aa)
Geranylgeranyl pyrophosphate synthetase n=1 Tax=Thermococcus sp. AM4 RepID=B7R2W5_9EURY
geranylgeranyl pyrophosphate synthase
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_13_30cm_scaffold_2542_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6644..7312)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_13_30cm_scaffold_2542_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7338..8363)
DNA (1026bp) protein (342aa)
Nmd3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBX2_9EURY
Nmd3
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_13_30cm_scaffold_2542_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8476..9075
DNA (600bp) protein (200aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9035..9331)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI0003652613
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_13_30cm_scaffold_2542_13
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(9345..11495)
DNA (2151bp) protein (717aa)
Putative ATPase involved in replication control, Cdc46/Mcm family n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HPR8_ACIS0 rbh
putative ATPase involved in replication control, Cdc46/Mcm family rbh
Tax=RBG_13_Euryarchaeota_57_23_curated
14_1009_13_30cm_scaffold_2542_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11859..12263
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A1694
formylmethanofuran dehydrogenase subunit E-like
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_2542_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12275..15721)
DNA (3447bp) protein (1149aa)
id=7201299 bin=TA06_GWE2_final species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=TA06_GWE2_final organism_group=TA06
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 15 items

View Taxonomy