ggKbase home page

14_0903_13_40cm_scaffold_6288

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_40cm_scaffold_6288_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..762
DNA (762bp) protein (254aa)
von Willebrand factor type A id=2108071 bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
14_0903_13_40cm_scaffold_6288_2
unknown

Not on your lists

comp(798..998)
DNA (201bp) protein (67aa)

This feature has no annotations

14_0903_13_40cm_scaffold_6288_3
unknown

Not on your lists

comp(1003..1461)
DNA (459bp) protein (153aa)

This feature has no annotations

14_0903_13_40cm_scaffold_6288_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1751..3232
DNA (1482bp) protein (494aa)
Betaine-aldehyde dehydrogenase (EC:1.2.1.8) rbh
betaine-aldehyde dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036DB83E rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJL71669.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
14_0903_13_40cm_scaffold_6288_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(3267..4169)
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=4208874 bin=GWC2_Nitrospirae_57_13 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
alpha/beta hydrolase
Tax=GWC2_Nitrospirae_57_13_curated
14_0903_13_40cm_scaffold_6288_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4246..5082)
DNA (837bp) protein (279aa)
ABC uptake transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID3_NITGG
ABC uptake transporter permease
Putative Zinc uptake transporter, permease protein {ECO:0000313|EMBL:AIC16364.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
14_0903_13_40cm_scaffold_6288_7
CG_Moran_01, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5079..5834)
DNA (756bp) protein (252aa)
polyamine-transporting ATPase (EC:3.6.3.31)
ABC-type transport system ATP-binding protein (Putative substrate zinc) n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRQ4_9EURY
Tax=CG_Moran_01
14_0903_13_40cm_scaffold_6288_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5818..6765)
DNA (948bp) protein (316aa)
Putative zinc transport system zinc-binding lipoprotein AdcA n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYW6_9FIRM
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:KCZ73164.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
adcA1; zinc-binding lipoprotein AdcA
14_0903_13_40cm_scaffold_6288_9

Not on your lists

6849..7244
DNA (396bp) protein (132aa)
Putative nickel responsive regulator 1 n=1 Tax=uncultured archaeon RepID=D1JIB2_9ARCH
Putative nickel responsive regulator 1 {ECO:0000313|EMBL:CBH38270.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
CopG family transcriptional regulator
14_0903_13_40cm_scaffold_6288_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7323..7706
DNA (384bp) protein (128aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_13_40cm_scaffold_6288_11
unknown

Not on your lists

comp(7725..8414)
DNA (690bp) protein (230aa)

This feature has no annotations

14_0903_13_40cm_scaffold_6288_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8528..9499)
DNA (972bp) protein (324aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_13_40cm_scaffold_6288_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9627..10034)
DNA (408bp) protein (136aa)
Putative nickel-responsive regulator n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=NIKR_PYRAB
nickel responsive regulator
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0903_13_40cm_scaffold_6288_14
unknown

Not on your lists

comp(10240..10347)
DNA (108bp) protein (36aa)

This feature has no annotations

14_0903_13_40cm_scaffold_6288_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

10504..10842
DNA (339bp) protein (113aa)
high-affinity nickel-transporter id=5045818 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_16_Euryarchaeota_68_13_curated
14_0903_13_40cm_scaffold_6288_trna_1
unknown

Not on your lists

10921..11032
DNA (112bp)
transferRNA Met
14_0903_13_40cm_scaffold_6288_16
unknown

Not on your lists

11261..12373
DNA (1113bp) protein (371aa)

This feature has no annotations

14_0903_13_40cm_scaffold_6288_17
unknown

Not on your lists

comp(12300..12938)
DNA (639bp) protein (213aa)

This feature has no annotations

Displaying 18 items

View Taxonomy