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14_1009_02_40cm_scaffold_2238

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_02_40cm_scaffold_2238_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2..184
DNA (183bp) protein (61aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_2
unknown

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417..896
DNA (480bp) protein (160aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2238_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1100..2230
DNA (1131bp) protein (377aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
Probable 3-isopropylmalate dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3V7_9DELT
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2238_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2232..2990)
DNA (759bp) protein (253aa)
ABC efflux transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFB3_NITGG
ABC efflux transporter permease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_5

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comp(2993..3739)
DNA (747bp) protein (249aa)
ABC-2 type transporter n=1 Tax=mine drainage metagenome RepID=T0ZLX4_9ZZZZ
ABC-2 type transporter {ECO:0000313|EMBL:EQD49346.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter
14_1009_02_40cm_scaffold_2238_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3744..4670)
DNA (927bp) protein (309aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=mine drainage metagenome RepID=T0ZBP6_9ZZZZ
ABC efflux transporter, ATP-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_02_40cm_scaffold_2238_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4719..5192)
DNA (474bp) protein (158aa)
glyoxalase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174505E
glyoxalase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(5332..5883)
DNA (552bp) protein (184aa)
Acetyltransferase, GNAT family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7G3_9THEO
WecD2; histone acetyltransferase HPA2-like acetyltransferase
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2238_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5901..6998)
DNA (1098bp) protein (366aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4) rbh
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FH06_SORC5 id=5223321 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7018..7923)
DNA (906bp) protein (302aa)
Lipoyl synthase, mitochondrial id=2487420 bin=GWA1_Deltaproteobacteria_52_35 species=Cyanidioschyzon merolae genus=Cyanidioschyzon taxon_order=Cyanidiales taxon_class=Bangiophyceae phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2238_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7971..8294)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003722417
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8444..9040
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036A9497
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9098..10390
DNA (1293bp) protein (431aa)
FAD dependent oxidoreductase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQ94_SYNFM
FAD dependent oxidoreductase
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2238_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10417..11211
DNA (795bp) protein (265aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TZ65_9FIRM
electron transfer flavoprotein beta subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_02_40cm_scaffold_2238_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11223..12275
DNA (1053bp) protein (351aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Clostridium ultunense Esp RepID=M1ZA90_9CLOT rbh
electron transfer flavoprotein subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12223..12942)
DNA (720bp) protein (240aa)
Octanoyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVF8_9BACT
lipoate-protein ligase B/lipoate synthase
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2238_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12947..14374)
DNA (1428bp) protein (476aa)
pdhD; dihydrolipoyl dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoyl dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUR8_9BACT
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2238_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14434..14937)
DNA (504bp) protein (168aa)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S9Z8_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 18 items

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