ggKbase home page

AR1-0.1_scaffold_62

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_62_1
unknown

Not on your lists

124..480
DNA (357bp) protein (119aa)

This feature has no annotations

AR1-0.1_scaffold_62_2
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(484..1332)
DNA (849bp) protein (283aa)
tryptophan synthase, alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Tryptophan synthase alpha chain n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR01_METIM
AR1-0.1_scaffold_62_3
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(1345..2742)
DNA (1398bp) protein (466aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=5091496 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Tryptophan synthase subunit beta, tryptophan synthase beta chain {ECO:0000313|EMBL:KKP38984.1}; EC=4.2.1.20 {ECO:0000313|EMBL:KKP38984.1};; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
AR1-0.1_scaffold_62_4

Not on your lists

comp(3008..4798)
DNA (1791bp) protein (597aa)
Anthranilate synthase, phenazine specific {ECO:0000313|EMBL:CEG12787.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CEG12787.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
Anthranilate synthase, phenazine specific (EC:4.1.3.27)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364431D rbh
AR1-0.1_scaffold_62_5
unknown

Not on your lists

comp(5114..5725)
DNA (612bp) protein (204aa)

This feature has no annotations

AR1-0.1_scaffold_62_6
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(6007..6867)
DNA (861bp) protein (287aa)
Tryptophan biosynthesis protein trpCF; K13498 indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] id=5098547 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
AR1-0.1_scaffold_62_7
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7255..7974)
DNA (720bp) protein (240aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:AEA34519.1}; EC=4.1.1.48 {ECO:0000313|EMBL:AEA34519.1};; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2).;"
Indole-3-glycerol-phosphate synthase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LU56_HIPMA
AR1-0.1_scaffold_62_8
unknown

Not on your lists

8654..8872
DNA (219bp) protein (73aa)

This feature has no annotations

AR1-0.1_scaffold_62_9
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8877..9350)
DNA (474bp) protein (158aa)
prolyl-tRNA synthetase n=1 Tax=Lactobacillus farciminis RepID=UPI000219737E
YbaK/prolyl-tRNA synthetase associated domain-containing protein {ECO:0000313|EMBL:ETD69755.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
proX; prolyl-tRNA editing protein ProX
AR1-0.1_scaffold_62_10
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9355..10617)
DNA (1263bp) protein (421aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5090922 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase {ECO:0000313|EMBL:KKW34289.1}; TaxID=1618650 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_53_7.;"
AR1-0.1_scaffold_62_11
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10790..12409
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJJ2_9BACT rbh
dehydrogenase rbh
Tax=CG_Falkow_03
AR1-0.1_scaffold_62_12
unknown

Not on your lists

12487..12801
DNA (315bp) protein (105aa)

This feature has no annotations

AR1-0.1_scaffold_62_13

Not on your lists

12904..13458
DNA (555bp) protein (185aa)
SUA5/YciO/YrdC/YwlC family protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AWR6_9BACT
SUA5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EKD66222.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
AR1-0.1_scaffold_62_14

Not on your lists

comp(13466..14581)
DNA (1116bp) protein (372aa)
protein of unknown function UPF0118 id=50213 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE27512.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_62_15
unknown

Not on your lists

comp(14670..15392)
DNA (723bp) protein (241aa)

This feature has no annotations

AR1-0.1_scaffold_62_16
unknown

Not on your lists

comp(15749..16039)
DNA (291bp) protein (97aa)

This feature has no annotations

AR1-0.1_scaffold_62_17
unknown

Not on your lists

16099..16296
DNA (198bp) protein (66aa)

This feature has no annotations

AR1-0.1_scaffold_62_18
unknown

Not on your lists

16333..17442
DNA (1110bp) protein (370aa)

This feature has no annotations

AR1-0.1_scaffold_62_19
unknown

Not on your lists

17540..18508
DNA (969bp) protein (323aa)

This feature has no annotations

AR1-0.1_scaffold_62_20
unknown

Not on your lists

18870..19910
DNA (1041bp) protein (347aa)

This feature has no annotations

AR1-0.1_scaffold_62_21
unknown

Not on your lists

19915..20070
DNA (156bp) protein (52aa)

This feature has no annotations

AR1-0.1_scaffold_62_22
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

Not on your lists

20199..21656
DNA (1458bp) protein (486aa)
Putative retron type reverse transcriptase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JD36_9FIRM
Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
AR1-0.1_scaffold_62_23
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

21663..22325
DNA (663bp) protein (221aa)
Recombinase {ECO:0000313|EMBL:KKT49458.1}; TaxID=1618392 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_44_18.;"
resolvase domain-containing protein id=22668 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
recombinase
AR1-0.1_scaffold_62_24
unknown

Not on your lists

22536..23144
DNA (609bp) protein (203aa)

This feature has no annotations

AR1-0.1_scaffold_62_trna_1
unknown

Not on your lists

comp(23111..23183)
DNA (73bp)
transferRNA Arg
AR1-0.1_scaffold_62_25

Not on your lists

comp(23457..25754)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FUF1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26548.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ATP-dependent DNA helicase RecQ
AR1-0.1_scaffold_62_26
unknown

Not on your lists

comp(25866..26213)
DNA (348bp) protein (116aa)

This feature has no annotations

AR1-0.1_scaffold_62_27
unknown

Not on your lists

comp(26204..26446)
DNA (243bp) protein (81aa)

This feature has no annotations

AR1-0.1_scaffold_62_28

Not on your lists

comp(26636..27262)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G988_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26699.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
alkyl hydroperoxide reductase
AR1-0.1_scaffold_62_29

Not on your lists

comp(27361..28602)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YMC0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44115.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 30 items

View Taxonomy