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AR1-0.1_scaffold_204

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_204_1

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comp(167..1969)
DNA (1803bp) protein (601aa)
pca:Pcar_1211 typA; GTP-binding protein TypA; K06207 GTP-binding protein id=69043 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66327.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_204_2
unknown

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comp(2180..2410)
DNA (231bp) protein (77aa)

This feature has no annotations

AR1-0.1_scaffold_204_3
Streptobacillus moniliformis, Streptobacillus, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(2561..3277)
DNA (717bp) protein (239aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=519441 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Streptobacillus.;" source="Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC; 10651 / 9901).;"
Uridylate kinase n=1 Tax=Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) RepID=D1AWM5_STRM9
AR1-0.1_scaffold_204_4
unknown

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comp(3288..4226)
DNA (939bp) protein (313aa)

This feature has no annotations

AR1-0.1_scaffold_204_5

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comp(4252..4716)
DNA (465bp) protein (155aa)
seg 5..21 id=49380 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27641.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_204_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4903..5958
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Ruminococcus lactaris RepID=B5CQV1_9FIRM
AR1-0.1_scaffold_204_7

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6105..6506
DNA (402bp) protein (134aa)
Nuc_deoxyrib_tr 28..104 id=132763 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24634.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_204_8

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6678..7274
DNA (597bp) protein (199aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GUD8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26955.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_204_9
unknown

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7382..8374
DNA (993bp) protein (331aa)

This feature has no annotations

AR1-0.1_scaffold_204_10
unknown

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8447..8773
DNA (327bp) protein (109aa)

This feature has no annotations

AR1-0.1_scaffold_204_11

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comp(8770..9384)
DNA (615bp) protein (205aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FB26_9BACT
AR1-0.1_scaffold_204_12

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comp(9375..10472)
DNA (1098bp) protein (366aa)
Polysaccharide pyruvyl transferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AX48_9BACT
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EKD66357.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_204_13
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

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10648..10992
DNA (345bp) protein (115aa)
UPI0003D06B87 related cluster n=1 Tax=unknown RepID=UPI0003D06B87
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
AR1-0.1_scaffold_204_14

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11099..11707
DNA (609bp) protein (203aa)
exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=33828 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29696.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Exonuclease RNase T and DNA polymerase III
AR1-0.1_scaffold_204_15

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11730..11954
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6Y1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26881.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_204_16

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12146..13132
DNA (987bp) protein (329aa)
Protein RecA n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FV90_9BACT rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recA; recombinase A
>lcl|Sequence 1 ORF:1..987 Frame +1 MDKKEALANALSMIEKQFWKWSIMLLWDDAAWQKVETTSSWSIWLDIALWGGYWKWRIVEIYWPESSWKT TLTLHAIAEVQKAWWTAAFIDAEHALDPEYARKIWVNTNELIISQPDYGEQALEIVDSLVRSWAVDLIII DSVAALTPKAEIEWDMWDSHMWLQARLMSQALRKITWAISKSKCTVIFINQIRMKIGVMFWNPETTTWGN ALKFYASQRLEVRKKDKIEEWTWDWKTITWNKTRVKVIKNKIAPPFREAEFDVMYNEWISKVWETLDIWV ELNIIKKSWAFYSYLETKLGQWRENAKQFLRENDKITNEIEEIIRNSL* Jill Banfield (4/7/16)
AR1-0.1_scaffold_204_17

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comp(13164..13925)
DNA (762bp) protein (254aa)
coiled-coil 81..102 id=49536 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27717.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Transcriptional regulator, TrmB
AR1-0.1_scaffold_204_18

Not on your lists

14056..15426
DNA (1371bp) protein (457aa)
hypothetical protein id=49817 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28409.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 18 items

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