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AR1-0.1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_38_1
unknown

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comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

AR1-0.1_scaffold_38_2

Not on your lists

comp(324..875)
DNA (552bp) protein (184aa)
putative O-methyltransferase id=34937 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
O-methyltransferase family 3 {ECO:0000313|EMBL:EKE27442.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
O-methyltransferase family protein
AR1-0.1_scaffold_38_3
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(886..1785)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYZ0_9BACT
cell division protein FtsX
Tax=ACD78
AR1-0.1_scaffold_38_4
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2015..3046
DNA (1032bp) protein (344aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:921 RepID=R5LEP0_9CLOT rbh
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase rbh
AR1-0.1_scaffold_38_5
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3036..3977)
DNA (942bp) protein (314aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
Methionyl-tRNA formyltransferase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=FMT_CALS8
methionyl-tRNA formyltransferase
AR1-0.1_scaffold_38_6
unknown

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comp(4010..4708)
DNA (699bp) protein (233aa)

This feature has no annotations

AR1-0.1_scaffold_38_7

Not on your lists

comp(4710..5762)
DNA (1053bp) protein (351aa)
tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO (EC:2.7.8.33)
glycosyl transferase family 4 id=50351 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Glycosyl transferase family 4 {ECO:0000313|EMBL:EKE28679.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_38_8
unknown

Not on your lists

comp(5777..6484)
DNA (708bp) protein (236aa)

This feature has no annotations

AR1-0.1_scaffold_38_9
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(6478..7335)
DNA (858bp) protein (286aa)
hypothetical protein; K01081 5'-nucleotidase [EC:3.1.3.5] id=132084 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
AR1-0.1_scaffold_38_10
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7341..8675)
DNA (1335bp) protein (445aa)
glycine hydroxymethyltransferase (EC:2.1.2.1) rbh
Serine hydroxymethyltransferase {ECO:0000313|EMBL:KKR22102.1}; TaxID=1618695 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWA2_39_41.;"
Serine hydroxymethyltransferase id=2823248 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
AR1-0.1_scaffold_38_11

Not on your lists

comp(8918..10192)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2A2D0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD44124.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
protease
AR1-0.1_scaffold_38_12

Not on your lists

10527..11897
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4I8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44131.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_38_13

Not on your lists

11916..13175
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXY5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26762.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_38_14
ACD78, Gracilibacteria, Bacteria

Not on your lists

13209..14612
DNA (1404bp) protein (468aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=123414 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
pepA; putative cytosol aminopeptidase (EC:3.4.11.1 3.4.11.10)
Tax=ACD78
AR1-0.1_scaffold_38_15
CG_PER_03, Peregrinibacteria, Bacteria

Not on your lists

14614..14853
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAI6_9CLOT id=983182 bin=RAAC1_SR1 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC1_SR1 organism_group=SR1
hypothetical protein
Tax=CG_PER_03
AR1-0.1_scaffold_38_16
RBG_13_OP11_Levybacteria_35_9_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

14945..15655
DNA (711bp) protein (237aa)
ComFC; amidophosphoribosyltransferase id=5095115 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
amidophosphoribosyltransferase
Tax=RBG_13_OP11_Levybacteria_35_9_curated
AR1-0.1_scaffold_38_17
unknown

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15720..16169
DNA (450bp) protein (150aa)

This feature has no annotations

AR1-0.1_scaffold_38_18

Not on your lists

16276..19161
DNA (2886bp) protein (962aa)
gka:GK3085 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=69640 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Excinuclease ABC subunit A rbh
AR1-0.1_scaffold_38_19
unknown

Not on your lists

19167..19481
DNA (315bp) protein (105aa)

This feature has no annotations

AR1-0.1_scaffold_38_20

Not on your lists

19472..20356
DNA (885bp) protein (295aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=69641 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylenolpyruvoylglucosamine reductase
AR1-0.1_scaffold_38_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

20363..21073
DNA (711bp) protein (237aa)
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] id=124002 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rluB; protein RluB (EC:4.2.1.70)
Tax=CG_GN02-01
AR1-0.1_scaffold_38_22
unknown

Not on your lists

comp(21124..21768)
DNA (645bp) protein (215aa)

This feature has no annotations

AR1-0.1_scaffold_38_23
unknown

Not on your lists

comp(21770..22444)
DNA (675bp) protein (225aa)

This feature has no annotations

AR1-0.1_scaffold_38_24
unknown

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22512..22901
DNA (390bp) protein (130aa)

This feature has no annotations

AR1-0.1_scaffold_38_25
ACD78, Gracilibacteria, Bacteria

Not on your lists

22915..25512
DNA (2598bp) protein (866aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DnaQ family exonuclease/DinG family helicase rbh
Tax=ACD78
AR1-0.1_scaffold_38_26
unknown

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25601..26443
DNA (843bp) protein (281aa)

This feature has no annotations

AR1-0.1_scaffold_38_27
unknown

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26452..27654
DNA (1203bp) protein (401aa)

This feature has no annotations

AR1-0.1_scaffold_38_28

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27672..28937
DNA (1266bp) protein (422aa)
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E id=123617 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30028.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_38_29
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

28964..30115
DNA (1152bp) protein (384aa)
type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=69473 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
type IV pilin
Tax=CG_GN02-01
AR1-0.1_scaffold_38_30
unknown

Not on your lists

30251..30829
DNA (579bp) protein (193aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

View Taxonomy