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AR1-0.1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_10_1
unknown

Not on your lists

comp(98..313)
DNA (216bp) protein (72aa)

This feature has no annotations

AR1-0.1_scaffold_10_2
unknown

Not on your lists

comp(756..1583)
DNA (828bp) protein (276aa)

This feature has no annotations

AR1-0.1_scaffold_10_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1771..2478
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:122 RepID=R5S6K6_9CLOT
16S rRNA methyltransferase
AR1-0.1_scaffold_10_4
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(2514..4355)
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=uncultured bacterium RepID=K2G5H5_9BACT rbh
glucosamine--fructose-6-phosphate aminotransferase rbh
Tax=CG_CPR16-01
AR1-0.1_scaffold_10_5
unknown

Not on your lists

comp(4410..4790)
DNA (381bp) protein (127aa)

This feature has no annotations

AR1-0.1_scaffold_10_6
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(4862..6007)
DNA (1146bp) protein (382aa)
protease Do; K01362 [EC:3.4.21.-] id=5802321 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
serine protease
Tax=CG_CPR04_01
AR1-0.1_scaffold_10_7
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(6093..7508)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HHQ3_9SPIR
hypothetical protein
Tax=CG_GN02-02
AR1-0.1_scaffold_10_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7609..9654)
DNA (2046bp) protein (682aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Ribonuclease R n=1 Tax=Clostridium intestinale URNW RepID=U2Q7F0_9CLOT rbh
ribonuclease R rbh
AR1-0.1_scaffold_10_9

Not on your lists

comp(9759..10340)
DNA (582bp) protein (194aa)
Protein grpE n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJW1_9FIRM id=69089 bin=ACD49 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
molecular chaperone GrpE
AR1-0.1_scaffold_10_10
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(10421..15151)
DNA (4731bp) protein (1577aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ82523.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
AR1-0.1_scaffold_10_11
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

15350..15865
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXA7_9BACT
hypothetical protein
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
AR1-0.1_scaffold_10_12

Not on your lists

15879..16664
DNA (786bp) protein (262aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] id=983087 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD24831.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_10_13
unknown

Not on your lists

comp(16680..17165)
DNA (486bp) protein (162aa)

This feature has no annotations

AR1-0.1_scaffold_10_14

Not on your lists

17297..17968
DNA (672bp) protein (224aa)
transmembrane_regions 27..49 id=124650 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29499.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_10_15

Not on your lists

comp(18011..19099)
DNA (1089bp) protein (363aa)
Dihydrofolate synthase / folylpolyglutamate synthase {ECO:0000313|EMBL:KHO47448.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KHO47448.1};; EC=6.3.2.17 {ECO:0000313|EMBL:KHO47448.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
FolC bifunctional protein id=4010270 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
AR1-0.1_scaffold_10_16
Vibrio sp. EJY3, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19102..19530)
DNA (429bp) protein (143aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 RepID=S6K8M5_VIBNA
MazG-related protein
MazG-related protein {ECO:0000313|EMBL:AEX24268.1}; TaxID=1116375 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. (strain EJY3).;"
AR1-0.1_scaffold_10_17

Not on your lists

comp(19535..20320)
DNA (786bp) protein (262aa)
ftn:FTN_0284 prophage maintenance system killer protein (DOC) id=69211 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD65860.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Fic family protein
AR1-0.1_scaffold_10_18
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20266..20523)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DX87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU87831.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
DNA-binding protein
AR1-0.1_scaffold_10_19
unknown

Not on your lists

comp(20588..21268)
DNA (681bp) protein (227aa)

This feature has no annotations

AR1-0.1_scaffold_10_20

Not on your lists

comp(21293..23491)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XI97_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30055.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
FtsK; DNA translocase FtsK rbh
AR1-0.1_scaffold_10_21
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23608..24873)
DNA (1266bp) protein (422aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
UPI0003D1B1D4 related cluster n=1 Tax=unknown RepID=UPI0003D1B1D4 rbh
Tax=BJP_IG2069_Syntrophobacterales_46_30
AR1-0.1_scaffold_10_22
unknown

Not on your lists

comp(24920..25207)
DNA (288bp) protein (96aa)

This feature has no annotations

AR1-0.1_scaffold_10_23
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25248..25646)
DNA (399bp) protein (133aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase id=3212460 bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
AR1-0.1_scaffold_10_24
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25704..26705)
DNA (1002bp) protein (334aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11) rbh
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YV2_METBU rbh
AR1-0.1_scaffold_10_25
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

comp(26814..28067)
DNA (1254bp) protein (418aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4)
Aspartokinase id=4368000 bin=GWF2_Bacteroidetes_40_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
AR1-0.1_scaffold_10_26
unknown

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comp(28195..28524)
DNA (330bp) protein (110aa)

This feature has no annotations

AR1-0.1_scaffold_10_27

Not on your lists

comp(28559..31027)
DNA (2469bp) protein (823aa)
Peptidase, M23/M37 family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRD0_9RHOB id=123269 bin=ACD78 species=Roseobacter sp. AzwK-3b genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Peptidase, M23/M37 family protein {ECO:0000313|EMBL:EKD30546.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_10_28

Not on your lists

31263..32045
DNA (783bp) protein (261aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=124395 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lgt; Prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
AR1-0.1_scaffold_10_29
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

32051..32581
DNA (531bp) protein (177aa)
peptidase, S54 (rhomboid) family (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BW85_9BACT
Tax=CG_GN02-02
AR1-0.1_scaffold_10_30
MPF_Thermotoga_lettingae_39_14, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(32557..33009)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0A9I6_CALLD
hypothetical protein
Tax=MPF_Thermotoga_lettingae_39_14
Displaying items 1-30 of 59 in total

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