ggKbase home page

AR1-0.1_scaffold_61

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_61_1

Not on your lists

comp(3373..4842)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AXH7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66471.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_61_2
unknown

Not on your lists

5011..5382
DNA (372bp) protein (124aa)

This feature has no annotations

AR1-0.1_scaffold_61_3

Not on your lists

5539..6327
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW39_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66042.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_61_4

Not on your lists

comp(6329..7090)
DNA (762bp) protein (254aa)
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSU3_SORC5
Marine sediment metagenome DNA, contig: S01H1_S04054 {ECO:0000313|EMBL:GAF85974.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase
AR1-0.1_scaffold_61_5

Not on your lists

comp(7151..7816)
DNA (666bp) protein (222aa)
SAM-dependent methyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=UPI00026CE450 id=982267 bin=RAAC1_SR1 species=Candidatus Nitrosoarchaeum limnia genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=RAAC1_SR1 organism_group=SR1
SAM-dependent methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EKE27208.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_61_6
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(7861..9273)
DNA (1413bp) protein (471aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XX19_9BACT
Tax=CG_GN02-02
AR1-0.1_scaffold_61_7

Not on your lists

comp(9371..10420)
DNA (1050bp) protein (350aa)
DNA replication and repair protein recF n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L916_RUMHA id=69060 bin=ACD49 species=Blautia hansenii genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA replication and repair protein RecF
AR1-0.1_scaffold_61_8
unknown

Not on your lists

comp(10436..10726)
DNA (291bp) protein (97aa)

This feature has no annotations

AR1-0.1_scaffold_61_9
unknown

Not on your lists

10824..11159
DNA (336bp) protein (112aa)

This feature has no annotations

AR1-0.1_scaffold_61_10

Not on your lists

11166..11717
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GU38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26865.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_61_trna_1
unknown

Not on your lists

11736..11806
DNA (71bp)
transferRNA Cys
AR1-0.1_scaffold_61_11
unknown

Not on your lists

12020..13540
DNA (1521bp) protein (507aa)

This feature has no annotations

AR1-0.1_scaffold_61_12
Leptotrichia buccalis, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13647..14981
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NDI4_LEPBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV38146.1}; Flags: Precursor;; TaxID=523794 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC; 10249).;"
AR1-0.1_scaffold_61_13
unknown

Not on your lists

comp(15262..15471)
DNA (210bp) protein (70aa)

This feature has no annotations

AR1-0.1_scaffold_61_14
unknown

Not on your lists

comp(15449..16384)
DNA (936bp) protein (312aa)

This feature has no annotations

AR1-0.1_scaffold_61_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16524..17375
DNA (852bp) protein (284aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A7_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ78493.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
AR1-0.1_scaffold_61_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17327..18235
DNA (909bp) protein (303aa)
ABC transporter related protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QK23_SPILD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23389.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ABC transporter rbh
AR1-0.1_scaffold_61_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18248..20011
DNA (1764bp) protein (588aa)
ABC transporter related protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QK24_SPILD rbh
multidrug ABC transporter
Multidrug ABC transporter {ECO:0000313|EMBL:AKD56501.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
AR1-0.1_scaffold_61_18

Not on your lists

comp(20048..20245)
DNA (198bp) protein (66aa)
cold-shock protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB50
Uncharacterized protein {ECO:0000313|EMBL:KKM05998.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cold-shock DNA-binding protein family
AR1-0.1_scaffold_61_19

Not on your lists

comp(20456..22375)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FW14_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26067.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_61_20
GWC2_OD1_35_35, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22451..23077)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP77819.1}; TaxID=1618751 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_35.;"
Putative uncharacterized protein id=5226941 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
AR1-0.1_scaffold_61_21

Not on your lists

23248..23553
DNA (306bp) protein (102aa)
hypothetical protein
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=983004 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ArsR family regulatory protein {ECO:0000313|EMBL:EKE27088.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_61_22

Not on your lists

23604..24683
DNA (1080bp) protein (360aa)
UPI0003CFF956 related cluster n=1 Tax=unknown RepID=UPI0003CFF956 rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EKD25265.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Cytochrome c biogenesis protein
AR1-0.1_scaffold_61_23
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

24811..25098
DNA (288bp) protein (96aa)
hypothetical protein
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=983004 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=CG_CPR16-01
AR1-0.1_scaffold_61_24

Not on your lists

25110..25349
DNA (240bp) protein (80aa)
redox-active disulfide protein 2 id=69259 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Redox-active disulfide protein 2 {ECO:0000313|EMBL:EKD65845.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Redox-active disulfide protein 2
AR1-0.1_scaffold_61_25

Not on your lists

25353..26324
DNA (972bp) protein (324aa)
UPI0003D064D9 related cluster n=1 Tax=unknown RepID=UPI0003D064D9 rbh
hypothetical protein
Permease {ECO:0000313|EMBL:EKD65846.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_61_26

Not on your lists

26464..27015
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G8K7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26469.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RNA polymerase, sigma-24 subunit, ECF subfamily protein
AR1-0.1_scaffold_61_27
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

27018..28715
DNA (1698bp) protein (566aa)
transmembrane_regions id=5091395 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=BJP_08E140C01_Falkowbacteria_33_19
AR1-0.1_scaffold_61_28
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28749..29861
DNA (1113bp) protein (371aa)
hypothetical protein
hypothetical protein id=983381 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=BJP_IG2158_Anaerolineales_38_74
AR1-0.1_scaffold_61_29

Not on your lists

comp(29883..30458)
DNA (576bp) protein (192aa)
non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; K01516 nucleoside-triphosphatase [EC:3.6.1.15] id=34904 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE30235.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Displaying 30 items

View Taxonomy