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AR1-0.65_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.65_scaffold_85_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2..1843
DNA (1842bp) protein (614aa)
Methyl-accepting chemotaxis protein id=4690345 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
mcp; methyl-accepting chemotaxis protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_2
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1922..2395
DNA (474bp) protein (158aa)
Chemotaxis signal transduction protein CheW id=3038092 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Chemotaxis signal transduction protein CheW
Tax=GWB2_Ignavibacteria_35_6b_curated
AR1-0.65_scaffold_85_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2507..6091
DNA (3585bp) protein (1195aa)
PAS domain S-box id=4435509 bin=GWF2_Melioribacter_38_21 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
multi-sensor signal transduction histidine kinase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6093..6848
DNA (756bp) protein (252aa)
Transcriptional regulator, Crp/Fnr family id=4364650 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
transcriptional regulator, Crp/Fnr family
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6994..8049
DNA (1056bp) protein (352aa)
Response regulator receiver sensor signal transduction histidine kinase id=4849123 bin=GWC2_Ignavibacteria_38_9 species=Nostoc sp. PCC 7107 genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
signal transduction histidine kinase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8156..10249)
DNA (2094bp) protein (698aa)
Methyl-accepting chemotaxis sensory transducer id=3770196 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
methyl-accepting chemotaxis sensory transducer rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_7
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10604..11122)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z9X4_MELRP
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_85_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11226..12170
DNA (945bp) protein (315aa)
NAD-dependent epimerase/dehydratase id=4468989 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
NAD-dependent epimerase/dehydratase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12207..13457
DNA (1251bp) protein (417aa)
TPR repeat protein id=2750646 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_trna_3
unknown

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comp(13699..13772)
DNA (74bp)
transferRNA Met
AR1-0.65_scaffold_85_trna_1
unknown

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14147..14232
DNA (86bp)
transferRNA Leu
AR1-0.65_scaffold_85_trna_2
unknown

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14261..14334
DNA (74bp)
transferRNA Val
AR1-0.65_scaffold_85_10
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14377..16308
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
Threonine--tRNA ligase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z2D9_MELRP rbh
threonyl-tRNA synthetase rbh
AR1-0.65_scaffold_85_11
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16359..16856
DNA (498bp) protein (166aa)
Translation initiation factor IF-3 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZMS1_MELRP
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
AR1-0.65_scaffold_85_12
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


16867..17058
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZW63_MELRP
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
AR1-0.65_scaffold_85_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


17074..17421
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJJ1_IGNAJ
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
AR1-0.65_scaffold_85_14
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


17480..18469
DNA (990bp) protein (330aa)
Phenylalanine--tRNA ligase alpha subunit id=3840416 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
Phenylalanyl-tRNA synthetase subunit alpha rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_15
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


18482..20884
DNA (2403bp) protein (801aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z2D3_MELRP rbh
Phenylalanyl-tRNA synthetase subunit beta rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_85_16
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20885..21199
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZMR5_MELRP
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
AR1-0.65_scaffold_85_17
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21232..21531
DNA (300bp) protein (100aa)
Uncharacterized protein id=3840412 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_18
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21761..23317
DNA (1557bp) protein (519aa)
Ribonuclease Y id=2900586 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
2',3'-cyclic-nucleotide 2'-phosphodiesterase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_85_19
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23307..23945
DNA (639bp) protein (213aa)
Dephospho-CoA kinase id=3817677 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
dephospho-CoA kinase
Tax=GWB2_Ignavibacteria_35_6b_curated
AR1-0.65_scaffold_85_20
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23963..24862
DNA (900bp) protein (300aa)
L-proline dehydrogenase id=2900584 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
proline dehydrogenase rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_85_21
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


24862..25872
DNA (1011bp) protein (337aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZMR2_MELRP rbh
O-sialoglycoprotein endopeptidase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_85_22
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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25882..26925
DNA (1044bp) protein (348aa)
Aminodeoxychorismate lyase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZW51_MELRP rbh
aminodeoxychorismate lyase rbh
Tax=RBG_13_Ignavibacteria_36_8_curated
AR1-0.65_scaffold_85_23
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

26901..28577
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YRX1_MELRP rbh
hypothetical protein rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_85_24
unknown

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28812..29102
DNA (291bp) protein (97aa)
virulence protein
AR1-0.65_scaffold_85_25
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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29131..29523
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=1770998 bin=GWD2_Bacteroidetes_33_33 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
AR1-0.65_scaffold_85_26
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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29553..30113
DNA (561bp) protein (187aa)
Uncharacterized protein id=4329239 bin=GWF2_Bacteroidetes_33_16 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
AR1-0.65_scaffold_85_27
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(30402..31559)
DNA (1158bp) protein (386aa)
Aminotransferase, class V id=2932901 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
aminotransferase, class V rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
Displaying items 1-30 of 39 in total

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