ggKbase home page

AR1-0.65_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.65_scaffold_31_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(432..1613)
DNA (1182bp) protein (394aa)
O-succinylhomoserine sulfhydrylase id=3800711 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
metZ; O-succinylhomoserine sulfhydrylase rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_31_2
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(1751..4189)
DNA (2439bp) protein (813aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
DNA gyrase subunit A n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2W9_MELRP rbh
DNA gyrase subunit A rbh
AR1-0.65_scaffold_31_3
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

comp(4202..5173)
DNA (972bp) protein (324aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCF8_HALP7 rbh
DNA methylase N-4/N-6 domain-containing protein rbh
Tax=CG_CPR06_01
AR1-0.65_scaffold_31_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5166..6161)
DNA (996bp) protein (332aa)
CBS domain containing protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z551_MELRP rbh
CBS domain containing protein rbh
CBS domain containing protein {ECO:0000313|EMBL:AFN74280.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
AR1-0.65_scaffold_31_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6174..8159)
DNA (1986bp) protein (662aa)
DNA gyrase subunit B id=3800698 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
gyrB; DNA gyrase subunit B rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
AR1-0.65_scaffold_31_6
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8177..8485)
DNA (309bp) protein (103aa)
Uncharacterized protein id=3095075 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_7
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8454..9566)
DNA (1113bp) protein (371aa)
DNA replication and repair protein RecF id=3881271 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
DNA replication and repair protein RecF rbh
Tax=GWB2_Ignavibacteria_35_6b_curated
AR1-0.65_scaffold_31_8
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9569..10693)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta id=3881270 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
DNA polymerase III, beta chain rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_9
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11008..11502)
DNA (495bp) protein (165aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTW7_CHLT3
phosphohistidine phosphatase SixA
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_10
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11499..12095)
DNA (597bp) protein (199aa)
Metal dependent phosphohydrolase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A4B9_MELRP
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFN74756.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
AR1-0.65_scaffold_31_11
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12155..12577
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H6L6_DENA2
NUDIX hydrolase
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_12
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12574..13254)
DNA (681bp) protein (227aa)
Cytochrome biogenesis protein CycZ id=2535421 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_13
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13254..13697)
DNA (444bp) protein (148aa)
Cbb3-type cytochrome c oxidase maturation protein CcoH id=2535424 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
FixH family protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_14
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13694..15103)
DNA (1410bp) protein (470aa)
Cbb3-type cytochrome c oxidase accessory protein CcoG id=4468327 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
polyferredoxin rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_15
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15121..15966)
DNA (846bp) protein (282aa)
Cbb3-type cytochrome c oxidase subunit III n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YVY3_MELRP rbh
cbb3-type cytochrome c oxidase subunit III rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_16
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15963..16154)
DNA (192bp) protein (64aa)
Cbb3-type cytochrome c oxidase subuni IV n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A4B4_MELRP
cbb3-type cytochrome c oxidase subuni IV
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
AR1-0.65_scaffold_31_17
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16163..18283)
DNA (2121bp) protein (707aa)
Cbb3-type cytochrome c oxidase subunit I/II n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z6G2_MELRP rbh
cbb3-type cytochrome c oxidase subunit I/II rbh
Cbb3-type cytochrome c oxidase subunit I/II {ECO:0000313|EMBL:AFN74750.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
AR1-0.65_scaffold_31_18
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18310..18453)
DNA (144bp) protein (48aa)
Cytochrome oxidase maturation protein, Cbb3-type id=4468240 bin=GWF2_Melioribacter_38_21 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
cbb3-type cytochrome c oxidase maturation protein CcoS
Tax=GWB2_Ignavibacteria_35_6b_curated
AR1-0.65_scaffold_31_19
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18444..20867)
DNA (2424bp) protein (808aa)
Cation transport ATPase id=4468238 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
cation transport ATPase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_20
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21025..23421
DNA (2397bp) protein (799aa)
hypothetical protein CSBG_00313 id=4328640 bin=GWF2_Ignavibacteria_35_20 species=Bacteroides oleiciplenus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
glycoside hydrolase family protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
AR1-0.65_scaffold_31_21
unknown

Not on your lists

23426..23920
DNA (495bp) protein (165aa)

This feature has no annotations

AR1-0.65_scaffold_31_22
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23931..24704
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR id=2535449 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_23
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24699..26102)
DNA (1404bp) protein (468aa)
ial:IALB_2968 SAM-dependent methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] id=718190 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
SAM-dependent methyltransferase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_24
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26129..26842)
DNA (714bp) protein (238aa)
Uncharacterized protein id=4328477 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
AR1-0.65_scaffold_31_25
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26856..27329)
DNA (474bp) protein (158aa)
Uncharacterized protein id=3529790 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_26
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27394..28578
DNA (1185bp) protein (395aa)
Putative SAM-dependent methyltransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN29_IGNAJ rbh
SAM-dependent methyltransferase rbh
Tax=RBG_13_Ignavibacteria_36_8_curated
AR1-0.65_scaffold_31_27
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(28575..29939)
DNA (1365bp) protein (455aa)
alpha amylase catalytic subunit id=3881833 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
glycosidase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_28
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30022..31041
DNA (1020bp) protein (340aa)
Putative permease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANC6_IGNAJ
permease
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_29
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

31588..33327
DNA (1740bp) protein (580aa)
Single-stranded-DNA-specific exonuclease RecJ id=3880600 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
single-stranded-DNA-specific exonuclease RecJ rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
AR1-0.65_scaffold_31_30
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

33351..34079
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein MROS_0745 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTY9_MELRP rbh
Transcriptional regulator rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
Displaying items 1-30 of 64 in total

View Taxonomy