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13_1_40cm_4_scaffold_5244

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5244_1
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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2..466
DNA (465bp) protein (155aa)
AAA ATPase, central region n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21MQ8_SACD2
AAA ATPase Tax=CG_Delta_03
AAA ATPase, central region
13_1_40cm_4_scaffold_5244_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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607..1656
DNA (1050bp) protein (350aa)
PhoH-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKR1_KORVE
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PhoH-like protein
13_1_40cm_4_scaffold_5244_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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1653..2108
DNA (456bp) protein (152aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acido
Endoribonuclease YbeY n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW5_9BACT
hypothetical protein
13_1_40cm_4_scaffold_5244_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2108..3394
DNA (1287bp) protein (429aa)
CBS domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKR3_KORVE
CBS domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_4_scaffold_5244_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3423..4370
DNA (948bp) protein (316aa)
GTPase Era n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKR4_KORVE
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin34
13_1_40cm_4_scaffold_5244_6
unknown

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comp(4447..5058)
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_4_scaffold_5244_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(5298..6656)
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021K3_SOLUE
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_5244_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(6653..8914)
DNA (2262bp) protein (754aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV5_KORVE
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_5244_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9178..10896
DNA (1719bp) protein (573aa)
Type II secretion system protein E n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV6_KORVE
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ABF40394.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_4_scaffold_5244_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10912..12036
DNA (1125bp) protein (375aa)
Pilus retraction protein PilT n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI4_CHLTF
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
pilus retraction protein PilT
13_1_40cm_4_scaffold_5244_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12093..13208
DNA (1116bp) protein (372aa)
Type II secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV8_KORVE
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type II secretion system protein
13_1_40cm_4_scaffold_5244_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13422..15035
DNA (1614bp) protein (538aa)
signal transduction histidine kinase, nitrogen specific, NtrB; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV9_KORVE
signal transduction histidine kinase, nitrogen specific, NtrB
13_1_40cm_4_scaffold_5244_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15042..16466
DNA (1425bp) protein (475aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW0_KORVE
two component, sigma54 specific, Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_5244_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17589..17789
DNA (201bp) protein (67aa)
Pilin, type IV, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC8_KORVE
pilin, type IV
Pilin, type IV, putative {ECO:0000313|EMBL:ABF40572.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
Displaying 14 items

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