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13_1_40cm_4_scaffold_5571

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5571_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1..1344)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036AC626
mdtA; multidrug efflux system subunit A
Multidrug efflux system, subunit A {ECO:0000313|EMBL:CBK43214.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_5571_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1702..2268
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BX0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81446.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_5571_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2784..5909)
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378B7A0
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABJ86432.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_4_scaffold_5571_4
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5916..6530)
DNA (615bp) protein (205aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYJ2_ACISM
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADW67590.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tun
13_1_40cm_4_scaffold_5571_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7231..8616)
DNA (1386bp) protein (462aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUY6_KORVE
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF39314.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_4_scaffold_5571_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8696..10168)
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABP5_GEMAT
two-component histidine kinase
13_1_40cm_4_scaffold_5571_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10318..10950)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V91_SOLUE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CDM64242.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
two component transcriptional regulator
13_1_40cm_4_scaffold_5571_8
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11060..11872
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000360C5B3
Collagen alpha-1(I) chain {ECO:0000313|EMBL:EYT84520.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
13_1_40cm_4_scaffold_5571_9
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11919..12581)
DNA (663bp) protein (221aa)
ABC-type transport system auxiliary component-like protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKV5_DESAA
ABC transporter
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_4_scaffold_5571_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(12604..13572)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E0DE7
hypothetical protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
mammalian cell entry related domain-containing protein
13_1_40cm_4_scaffold_5571_11
bacterium UASB270, Bacteria

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comp(13596..14429)
DNA (834bp) protein (278aa)
ABC-type transport system {ECO:0000313|EMBL:GAK59650.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component id=4225144 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative ABC-type transporter, ATPase component
13_1_40cm_4_scaffold_5571_12
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(14445..15242)
DNA (798bp) protein (266aa)
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative uncharacterized protein id=4225143 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_4_scaffold_5571_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15284..15616)
DNA (333bp) protein (111aa)
Anti-sigma factor antagonist n=1 Tax=uncultured Acidobacterium sp. RepID=Q83WI0_9BACT
anti-sigma-B factor antagonist RbsV Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-sigma-factor antagonist
13_1_40cm_4_scaffold_5571_14
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15625..16089)
DNA (465bp) protein (155aa)
putative anti-sigma regulatory factor; K04757 anti-sigma B factor [EC:2.7.11.1] Tax=RBG_13_Deltaproteobacteria_47_9_curated
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL30_SYNFM
putative anti-sigma regulatory factor
13_1_40cm_4_scaffold_5571_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17045..17842)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A9L3_9CLOT
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EXG86290.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
Displaying 15 items

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