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PLM4_65_b1_redo_sep16_scaffold_24740

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_24740_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..2095)
DNA (2094bp) protein (698aa)
RHS repeat-associated core domain {ECO:0000313|EMBL:CDM65141.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
id=4014191 bin=GWF2_Geobacter_54_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_b1_redo_sep16_scaffold_24740_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2153..3616)
DNA (1464bp) protein (488aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_24740_3
unknown

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comp(3831..4220)
DNA (390bp) protein (130aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_24740_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5159..5728)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYV0_METPS
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDM65813.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_24740_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5715..6218)
DNA (504bp) protein (168aa)
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDM65813.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_24740_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6225..8597)
DNA (2373bp) protein (791aa)
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CDM65819.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDM65819.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
soluble lytic murein transglycosylase (EC:3.2.1.-)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIK0_CHLTF
PLM4_65_b1_redo_sep16_scaffold_24740_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8730..10088)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIK1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65820.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_24740_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10312..10710
DNA (399bp) protein (133aa)
Two-component response regulator Tax=Cystobacter fuscus DSM 2262 RepID=S9QEX0_9DELT
Response regulator {ECO:0000313|EMBL:AKF80173.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
response regulator
PLM4_65_b1_redo_sep16_scaffold_24740_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11094..11570)
DNA (477bp) protein (159aa)
DinB-like domain protein
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_b1_redo_sep16_scaffold_24740_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11607..12617)
DNA (1011bp) protein (337aa)
Methyltransferase type 12 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J4Q3_NOSP7
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDM64526.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methyltransferase type 12
PLM4_65_b1_redo_sep16_scaffold_24740_11
unknown

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comp(12764..13015)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_24740_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13189..13647)
DNA (459bp) protein (153aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:KGJ89980.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_24740_13
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13868..15181)
DNA (1314bp) protein (438aa)
Aminotransferase, class V bin=GWA2_Ignavibacteriae_54_16_partial species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
isopenicillin N epimerase
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_65_b1_redo_sep16_scaffold_24740_14
unknown

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15419..15481
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 14 items

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