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PLM4_65_b1_redo_sep16_scaffold_24912

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_24912_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..1872
DNA (1872bp) protein (624aa)
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:CDM66228.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM66228.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug ABC transporter ATPase/permease (EC:3.6.3.-)
ABC-type multidrug transport system, ATPase and permease components Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHA9_CHLTF
PLM4_65_b1_redo_sep16_scaffold_24912_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2017..2886
DNA (870bp) protein (290aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEB0_CHLTF
TIGR00255 family protein {ECO:0000313|EMBL:CDM66227.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_24912_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2876..3604
DNA (729bp) protein (243aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEB1_CHLTF
PLM4_65_b1_redo_sep16_scaffold_24912_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3640..3867
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpoZ; DNA-directed RNA polymerase omega subunit (EC:2.7.7.6)
PLM4_65_b1_redo_sep16_scaffold_24912_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3906..5624)
DNA (1719bp) protein (573aa)
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:CDM64097.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CDM64097.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Tax=mine drainage metagenome RepID=E6PG49_9ZZZZ bin=16ft_combo_ws3_JS1 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
electron-transferring-flavoprotein dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_24912_6
unknown

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comp(5854..5997)
DNA (144bp) protein (48aa)

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Displaying 6 items

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