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PLM4_65_b1_redo_sep16_scaffold_3643

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3643_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(233..1396)
DNA (1164bp) protein (388aa)
Two-component system, NtrC family, response regulator HydG Tax=uncultured Acidobacteria bacterium RepID=H5SQ07_9BACT
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM65229.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sigma-54 dependent DNA-binding response regulator
PLM4_65_b1_redo_sep16_scaffold_3643_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1922..3574)
DNA (1653bp) protein (551aa)
60 kDa chaperonin Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG60_CHLTF
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chaperonin GroL
PLM4_65_b1_redo_sep16_scaffold_3643_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3636..3968)
DNA (333bp) protein (111aa)
10 kDa chaperonin Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG61_CHLTF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Co-chaperonin GroES (HSP10)
PLM4_65_b1_redo_sep16_scaffold_3643_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4195..4434)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease VII small subunit {ECO:0000313|EMBL:CDM65111.1}; EC=3.1.11.6 {ECO:0000313|EMBL:CDM65111.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Transcriptional regulator, Fis family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VW0_SOLUE
Fis family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_3643_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4477..5373)
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
PLM4_65_b1_redo_sep16_scaffold_3643_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5678..7831
DNA (2154bp) protein (718aa)
Aminopeptidase N {ECO:0000313|EMBL:CDM65114.1}; EC=3.4.11.2 {ECO:0000313|EMBL:CDM65114.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Aminopeptidase N Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHF4_CHLTF
aminopeptidase N
PLM4_65_b1_redo_sep16_scaffold_3643_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7800..8288
DNA (489bp) protein (163aa)
Aminopeptidase N {ECO:0000313|EMBL:CDM65114.1}; EC=3.4.11.2 {ECO:0000313|EMBL:CDM65114.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptidase M1 membrane alanine aminopeptidase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYM6_HALO1
peptidase M1 membrane alanine aminopeptidase
PLM4_65_b1_redo_sep16_scaffold_3643_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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8600..9373
DNA (774bp) protein (258aa)
Response regulator DrrA Tax=Salinibacter ruber RepID=D5HC70_SALRM
drrA; response regulator DrrA
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM4_65_b1_redo_sep16_scaffold_3643_9
unknown

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9489..10655
DNA (1167bp) protein (389aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3643_10
unknown

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comp(10867..11082)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3643_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11183..12553
DNA (1371bp) protein (457aa)
TonB family protein {ECO:0000313|EMBL:CDM65823.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
serine/threonine protein kinase with TPR repeats
PLM4_65_b1_redo_sep16_scaffold_3643_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12616..13671
DNA (1056bp) protein (352aa)
Roadblock/LC7 domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEW4_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM65822.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Roadblock/LC7 domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_3643_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13712..15289
DNA (1578bp) protein (526aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65294.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3643_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15457..16197
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65115.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_3643_15
unknown

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16368..16547
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 15 items

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