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PLM4_65_b1_redo_sep16_scaffold_16034

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_16034_1
unknown

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2..499
DNA (498bp) protein (166aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_16034_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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561..1031
DNA (471bp) protein (157aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEX3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_16034_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

991..1968
DNA (978bp) protein (326aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEX3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_16034_4
unknown

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comp(1867..2100)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_16034_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2159..2626)
DNA (468bp) protein (156aa)
Uncharacterized conserved protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC6_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66063.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_16034_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2898..3908
DNA (1011bp) protein (337aa)
Phosphotransacetylase {ECO:0000313|EMBL:CDM66979.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CDM66979.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHJ1_CHLTF
PLM4_65_b1_redo_sep16_scaffold_16034_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4210..5217
DNA (1008bp) protein (336aa)
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM65620.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_16034_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5349..6476)
DNA (1128bp) protein (376aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDM66980.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Response regulator receiver modulated metal dependent phosphohydrolase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator
PLM4_65_b1_redo_sep16_scaffold_16034_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6768..7103)
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI09_CHLTF
Glycine zipper {ECO:0000313|EMBL:CDM66701.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_16034_trna_1
unknown

Not on your lists

comp(7276..7359)
DNA (84bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_16034_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7653..8927
DNA (1275bp) protein (425aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHR8_CORCM
Uncharacterized protein {ECO:0000313|EMBL:ETX03093.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_16034_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8940..9848
DNA (909bp) protein (303aa)
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI00034CA885
DNA adenine methylase Dam
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_16034_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10083..11594
DNA (1512bp) protein (504aa)
Formiminoglutamic iminohydrolase protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U8M2_9DELT
Formiminoglutamic iminohydrolase {ECO:0000313|EMBL:KFE71423.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
N-formimino-L-glutamate deiminase
PLM4_65_b1_redo_sep16_scaffold_16034_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11921..13054
DNA (1134bp) protein (378aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
argE; acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FW28_STIAD
PLM4_65_b1_redo_sep16_scaffold_16034_14

Not on your lists

13310..14314
DNA (1005bp) protein (335aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJZ2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AIA10508.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 15 items

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