ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_19376

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_19376_1
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

23..925
DNA (903bp) protein (301aa)
Subunit A 3-oxoadipate CoA-transferase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
Tax=GWC2_Elusimicrobia_65_9_curated
PLM4_65_b1_redo_sep16_scaffold_19376_2
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

935..1687
DNA (753bp) protein (251aa)
catJ; 3-oxoadipate CoA-transferase (EC:2.8.3.6)
3-oxoacid CoA-transferase bin=RBG_16_Aminicenantes_63_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_13_Aminicenantes_59_9_curated
PLM4_65_b1_redo_sep16_scaffold_19376_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1746..3317)
DNA (1572bp) protein (524aa)
von Willebrand factor type A domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHY1_CHLTF
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM65577.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
von Willebrand factor type A domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_19376_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3496..4440)
DNA (945bp) protein (315aa)
Response regulator receiver modulated diguanylate cyclase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQ60_DESK7
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM66306.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator receiver modulated diguanylate cyclase
PLM4_65_b1_redo_sep16_scaffold_19376_5
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4645..5685)
DNA (1041bp) protein (347aa)
Phosphate transporter Tax=Leptonema illini DSM 21528 RepID=H2CIP1_9LEPT
Phosphate transporter {ECO:0000313|EMBL:EHQ07057.1}; Flags: Precursor;; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
phosphate transporter
PLM4_65_b1_redo_sep16_scaffold_19376_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5861..6484)
DNA (624bp) protein (208aa)
hypothetical protein; K07220 hypothetical protein bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_19376_7
unknown

Not on your lists

comp(6583..6891)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 7 items

View Taxonomy