ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_8530

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8530_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1..642)
DNA (642bp) protein (214aa)
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:CDM66890.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transport system permease; K02015 iron complex transport system permease protein bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
bhuU; hemin permease
PLM4_65_b1_redo_sep16_scaffold_8530_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(642..1481)
DNA (840bp) protein (280aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:CDM66107.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CDM66107.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] bin=bin1_lowGC species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
ABC-type Fe(3+) transport system, ATP binding protein (ATPase)
PLM4_65_b1_redo_sep16_scaffold_8530_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1481..2395)
DNA (915bp) protein (305aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:CDM66106.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein bin=bin1_lowGC species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
periplasmic binding protein
PLM4_65_b1_redo_sep16_scaffold_8530_4
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2367..2573)
DNA (207bp) protein (69aa)
Putative orphan protein Tax=Microscilla marina ATCC 23134 RepID=A1ZF07_9BACT
Putative orphan protein {ECO:0000313|EMBL:EAY31109.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8530_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2577..5021)
DNA (2445bp) protein (815aa)
Outer membrane receptor for ferrienterochelin and colicins Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEE3_CHLTF
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDM66104.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ferrienterochelin and colicins outer membrane receptor
PLM4_65_b1_redo_sep16_scaffold_8530_6
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5306..6727)
DNA (1422bp) protein (474aa)
Cobyrinic acid A,C-diamide synthase Tax=Desulfococcus multivorans DSM 2059 RepID=S7UP89_DESML
cobyrinic acid A,C-diamide synthase
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM4_65_b1_redo_sep16_scaffold_8530_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7699..9267
DNA (1569bp) protein (523aa)
cobyric acid synthase CobQ (EC:6.3.5.10)
Cobyric acid synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEE8_CHLTF
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_8530_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9965..10633
DNA (669bp) protein (223aa)
ATP-binding protein; K06927 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
ATP-binding domain-containing protein
Tax=CSP1_2_Dadabacteria
Displaying 8 items

View Taxonomy